RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PPP2R3CQ969Q6 453 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 EMID1Q96A84 441 aaPredicted RBP6.08□□□□□ -1.44
SPG11-208ENST00000558155 IL17RAQ96F46 866 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 TTC14Q96N46 770 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 PHOX2BQ99453 314 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 TMEM47Q9BQJ4 181 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 TCP11L1Q9NUJ3 509 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 CD207Q9UJ71 328 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 DDX41Q9UJV9 622 aaKnown RBP6.08□□□□□ -1.44
SPG11-208ENST00000558155 RWDD3Q9Y3V2 267 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 MYO7AQ13402 2215 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 ZNF318Q5VUA4 2279 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 FRMPD2Q68DX3 1309 aaPredicted RBP6.07□□□□□ -1.44
SPG11-208ENST00000558155 ORC4O43929 436 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 NMT2O60551 498 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 GFRA3O60609 400 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 BMPR1AP36894 532 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 ZXDAP98168 799 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 ZNF200P98182 395 aaPredicted RBP6.07□□□□□ -1.44
SPG11-208ENST00000558155 CTDSPL2Q05D32 466 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 SMAD4Q13485 552 aaKnown RBP6.07□□□□□ -1.44
SPG11-208ENST00000558155 MBTPS1Q14703 1052 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 CLUL1Q15846 466 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 TRIM71Q2Q1W2 868 aaKnown RBP6.07□□□□□ -1.44
SPG11-208ENST00000558155 ARHGEF16Q5VV41 709 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 TRAF7Q6Q0C0 670 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 FBXL6Q8N531 539 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 PRSS33Q8NF86 280 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 PPTC7Q8NI37 304 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 ANKS1AQ92625 1134 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 ATOH1Q92858 354 aaPredicted RBP6.07□□□□□ -1.44
SPG11-208ENST00000558155 APBB2Q92870 758 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 ATP6V0A1Q93050 837 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 TAAR1Q96RJ0 339 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 RMDN3Q96TC7 470 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 SEC62Q99442 399 aaKnown RBP6.07□□□□□ -1.44
SPG11-208ENST00000558155 C11orf84Q9BUA3 381 aaPredicted RBP6.07□□□□□ -1.44
SPG11-208ENST00000558155 IGFLR1Q9H665 355 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 INCENPQ9NQS7 918 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 TOMM22Q9NS69 142 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 ANAPC4Q9UJX5 808 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.07□□□□□ -1.44
SPG11-208ENST00000558155 MRVI1Q9Y6F6 885 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 KIAA1217Q5T5P2 1943 aa6.07□□□□□ -1.44
SPG11-208ENST00000558155 ABCB11O95342 1321 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 TECTAO75443 2155 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 C17orf102A2RUQ5 167 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 C5orf67F2Z3F1 127 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 TK2O00142 265 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 CAND2O75155 1236 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 F2P00734 622 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 NR3C2P08235 984 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 FGRP09769 529 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 TGFB3P10600 412 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 PDHBP11177 359 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 GNAT1P11488 350 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 CTNNB1P35222 781 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 DLX2Q07687 328 aaPredicted RBP6.06□□□□□ -1.44
SPG11-208ENST00000558155 ZNF543Q08ER8 600 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 HYAL1Q12794 435 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 TCF15Q12870 199 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 ADAM15Q13444 863 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 USH1GQ495M9 461 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 RRP12Q5JTH9 1297 aaKnown RBP6.06□□□□□ -1.44
SPG11-208ENST00000558155 ZMYM1Q5SVZ6 1142 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 GPATCH4Q5T3I0 446 aaKnown RBP6.06□□□□□ -1.44
SPG11-208ENST00000558155 RASGRP2Q7LDG7 609 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 SERINC5Q86VE9 423 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 SYTL5Q8TDW5 730 aaPredicted RBP6.06□□□□□ -1.44
SPG11-208ENST00000558155 TBC1D5Q92609 795 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 WNT8BQ93098 351 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 SPATA33Q96N06 139 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 FSD1Q9BTV5 496 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 PLVAPQ9BX97 442 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 IFIH1Q9BYX4 1025 aaKnown RBP6.06□□□□□ -1.44
SPG11-208ENST00000558155 MRPL11Q9Y3B7 192 aaKnown RBP6.06□□□□□ -1.44
SPG11-208ENST00000558155 CHD9Q3L8U1 2897 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 KAT6AQ92794 2004 aa6.06□□□□□ -1.44
SPG11-208ENST00000558155 PTPRZ1P23471 2315 aaPredicted RBP6.05□□□□□ -1.44
SPG11-208ENST00000558155 NLRC5Q86WI3 1866 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.05□□□□□ -1.44
SPG11-208ENST00000558155 H3BRB1 525 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 GRM6O15303 877 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 EYA4O95677 639 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 ZNF286BP0CG31 522 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 HSPD1P10809 573 aaKnown RBP6.05□□□□□ -1.44
SPG11-208ENST00000558155 HOXD8P13378 290 aaPredicted RBP6.05□□□□□ -1.44
SPG11-208ENST00000558155 AVPR2P30518 371 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 NDUFV1P49821 464 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 SIGLEC14Q08ET2 396 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 ALX1Q15699 326 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 NAALADL2Q58DX5 795 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 CELF3Q5SZQ8 465 aaKnown RBP6.05□□□□□ -1.44
SPG11-208ENST00000558155 MYSM1Q5VVJ2 828 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 KCTD12Q96CX2 325 aaKnown RBP6.05□□□□□ -1.44
SPG11-208ENST00000558155 UBA5Q9GZZ9 404 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 RNPEPQ9H4A4 650 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 TUT1Q9H6E5 874 aaKnown RBP6.05□□□□□ -1.44
SPG11-208ENST00000558155 DCTPP1Q9H773 170 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 MLXIPQ9HAP2 919 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms