RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 REXO2Q9Y3B8 237 aaKnown RBP9.92□□□□□ -0.82
PPP4R3A-212ENST00000557382 RABGAP1Q9Y3P9 1069 aa9.92□□□□□ -0.82
PPP4R3A-212ENST00000557382 PCDHA2Q9Y5H9 948 aa9.92□□□□□ -0.82
PPP4R3A-212ENST00000557382 PCDHAC2Q9Y5I4 1007 aa9.92□□□□□ -0.82
PPP4R3A-212ENST00000557382 COL4A3BPQ9Y5P4 624 aa9.92□□□□□ -0.82
PPP4R3A-212ENST00000557382 V9GYY5 206 aaPredicted RBP9.92□□□□□ -0.82
PPP4R3A-212ENST00000557382 ANO9A1A5B4 782 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 FAM196BA6NMK8 535 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 GDF11O95390 407 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 LCA5LO95447 670 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 CYP11B2P19099 503 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 STAT2P52630 851 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 SLC12A3P55017 1021 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 CHMP4BP1P59074 171 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 MAP3K10Q02779 954 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 GABPB1Q06547 395 aaPredicted RBP9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 BRD3Q15059 726 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 DLGAP5Q15398 846 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 GPBP1Q86WP2 473 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 OGFOD1Q8N543 542 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 SYT2Q8N9I0 419 aaPredicted RBP9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 LRRN4CLQ8ND94 238 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 AGBL3Q8NEM8 1001 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 LENG9Q96B70 501 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 RPGRIP1Q96KN7 1286 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 NHEJ1Q9H9Q4 299 aaPredicted RBP9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 GINM1Q9NU53 330 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 PRR12Q9ULL5 1215 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 DNM3Q9UQ16 869 aa9.91□□□□□ -0.82
PPP4R3A-212ENST00000557382 SSU72P8A0A1W2PR75 194 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 E9PMD0 336 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 RAD21O60216 631 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 USO1O60763 962 aaKnown RBP9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 MED24O75448 989 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 ZRANB2O95218 330 aaKnown RBP eCLIP9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 GAP43P17677 238 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 VAV2P52735 878 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 HERVK_113P62684 666 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 AMPD2Q01433 879 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 IKQ13123 557 aaPredicted RBP9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 SPA17Q15506 151 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 BMT2Q1RMZ1 405 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 PRR16Q569H4 304 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 PAPD7Q5XG87 772 aaKnown RBP9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 CHADLQ6NUI6 762 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 KIAA1328Q86T90 577 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 SAMD3Q8N6K7 520 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 MSANTD4Q8NCY6 345 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 SLC16A10Q8TF71 515 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 HNRNPLLQ8WVV9 542 aaKnown RBP9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 HPS3Q969F9 1004 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 JAKMIP2Q96AA8 810 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 IRX2Q9BZI1 471 aaPredicted RBP9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 RANBP17Q9H2T7 1088 aaKnown RBP9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 KCTD10Q9H3F6 313 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 TUFT1Q9NNX1 390 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 AGPAT5Q9NUQ2 364 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 FEM1BQ9UK73 627 aa9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 MRPL11Q9Y3B7 192 aaKnown RBP9.9□□□□□ -0.82
PPP4R3A-212ENST00000557382 A0A1W2PRG0 241 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CTAGE15A4D2H0 777 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CCDC151A5D8V7 595 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 POTECB2RU33 542 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 GCOM1H8Y6P7 765 aaPredicted RBP9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 TRAF5O00463 557 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 OPLAHO14841 1288 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CETN3O15182 167 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 MSH4O15457 936 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 EYA4O95677 639 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 KRT18P05783 430 aaKnown RBP9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 POLR2MP0CAP2 368 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CTAGE8P0CG41 777 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 SPATA31C1P0DKV0 1188 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CBX1P83916 185 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CKAP4Q07065 602 aaKnown RBP9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 GIT2Q14161 759 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 RRP1BQ14684 758 aaKnown RBP9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CCDC40Q4G0X9 1142 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 HERC4Q5GLZ8 1057 aaPredicted RBP9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 TEX35Q5T0J7 233 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CCDC122Q5T0U0 273 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 TRAPPC11Q7Z392 1133 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CTAGE6Q86UF2 777 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CATSPER3Q86XQ3 398 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 TRIM59Q8IWR1 403 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CTAGE4Q8IX94 777 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 MSL3Q8N5Y2 521 aaKnown RBP9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 NEK11Q8NG66 645 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CCDC42Q96M95 316 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 VCPKMTQ9H867 229 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 EMILIN3Q9NT22 766 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 ZNF446Q9NWS9 450 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 CEP72Q9P209 647 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 VAV3Q9UKW4 847 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 RAB21Q9UL25 225 aa9.89□□□□□ -0.83
PPP4R3A-212ENST00000557382 PNMA2Q9UL42 364 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms