RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CTDNEP1O95476 244 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 GJB1P08034 283 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 GOLGA8HP0CJ92 632 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 PCP11498 1178 aaKnown RBP6.18□□□□□ -1.42
ATXN3-244ENST00000556898 CAPN2P17655 700 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 HOXD10P28358 340 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 CAP2P40123 477 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 LIFRP42702 1097 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 NOVP48745 357 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 LACTBP83111 547 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-244ENST00000556898 ZYXQ15942 572 aaKnown RBP6.18□□□□□ -1.42
ATXN3-244ENST00000556898 SLC35G1Q2M3R5 365 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 IFIT1BQ5T764 474 aaKnown RBP6.18□□□□□ -1.42
ATXN3-244ENST00000556898 SAMD5Q5TGI4 173 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-244ENST00000556898 MICU3Q86XE3 530 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 IQCA1Q86XH1 822 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 ZNF654Q8IZM8 581 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 STAG2Q8N3U4 1231 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 STK32AQ8WU08 396 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 ANKS1AQ92625 1134 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 IPO9Q96P70 1041 aaKnown RBP6.18□□□□□ -1.42
ATXN3-244ENST00000556898 WRNIP1Q96S55 665 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 ZCCHC17Q9NP64 241 aaKnown RBP6.18□□□□□ -1.42
ATXN3-244ENST00000556898 TCP11L1Q9NUJ3 509 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 MTMR4Q9NYA4 1195 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 ZNF112Q9UJU3 913 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
ATXN3-244ENST00000556898 FRMPD2Q68DX3 1309 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-244ENST00000556898 PLIN4Q96Q06 1357 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 ELOA3CA0A087WX78 387 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 hCG_1642624A0A1W2PR95 340 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 ELOA3DA6NLF2 546 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 ZBTB43O43298 467 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 PLEKHA8P1O95397 391 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SPATA31C1P0DKV0 1188 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 TOP1P11387 765 aaKnown RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 CETPP11597 493 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 GJA8P48165 433 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 METAP2P50579 478 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 EVCP57679 992 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 ICA1Q05084 483 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 TROAPQ12815 778 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 CUL4AQ13619 759 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 VGLL4Q14135 290 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 BECN1Q14457 450 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SART3Q15020 963 aaKnown RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 ANKRD1Q15327 319 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SWI5Q1ZZU3 235 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 ELOA3BQ3SY89 546 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 NKAPLQ5M9Q1 402 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 DCAF15Q66K64 600 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 TTBK2Q6IQ55 1244 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 APOA5Q6Q788 366 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 C8orf86Q6ZUL3 223 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 TMEM179Q6ZVK1 233 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SYT9Q86SS6 491 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SGMS1Q86VZ5 419 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 DGKHQ86XP1 1220 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SCYL3Q8IZE3 742 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 FBXL16Q8N461 479 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 TSEN2Q8NCE0 465 aaKnown RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 ELOA3Q8NG57 546 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 FAM200AQ8TCP9 573 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 PIBF1Q8WXW3 757 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 PHKBQ93100 1093 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 GTF3C6Q969F1 213 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 DDX11Q96FC9 970 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 ZNF274Q96GC6 653 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 CCDC17Q96LX7 622 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 NUP88Q99567 741 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SLKQ9H2G2 1235 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 KAT14Q9H8E8 782 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 ZNF287Q9HBT7 754 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 CABP5Q9NP86 173 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 STARD13Q9Y3M8 1113 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 CSADQ9Y600 493 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SLC12A7Q9Y666 1083 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 SNCAIPQ9Y6H5 919 aa6.17□□□□□ -1.42
ATXN3-244ENST00000556898 GREB1LQ9C091 1923 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 KIAA0100Q14667 2235 aaKnown RBP6.17□□□□□ -1.42
ATXN3-244ENST00000556898 FAM229AH3BQW9 127 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 CTNND1O60716 968 aaKnown RBP6.16□□□□□ -1.42
ATXN3-244ENST00000556898 TTLL1O95922 423 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 NDUFB10O96000 172 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 CCL5P13501 91 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 FDPSP14324 419 aaKnown RBP6.16□□□□□ -1.42
ATXN3-244ENST00000556898 TAL1P17542 331 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-244ENST00000556898 PTPRAP18433 802 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 GRK4P32298 578 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 PSMC4P43686 418 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 MCM2P49736 904 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 SNAP25P60880 206 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 UBXN2AP68543 259 aa6.16□□□□□ -1.42
ATXN3-244ENST00000556898 SFSWAPQ12872 951 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms