RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 CPLX4Q7Z7G2 160 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 TBC1D1Q86TI0 1168 aaPredicted RBP9.4□□□□□ -0.9
MARK3-210ENST00000556463 NLRP14Q86W24 1093 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 ADAMTS19Q8TE59 1207 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 ATP6V1G3Q96LB4 118 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.9
MARK3-210ENST00000556463 PCDH11XQ9BZA7 1347 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 PCDH11YQ9BZA8 1340 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 GRID2IPA4D2P6 1211 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 HMGB1P1B2RPK0 211 aaPredicted RBP9.4□□□□□ -0.9
MARK3-210ENST00000556463 PCP11498 1178 aaKnown RBP9.4□□□□□ -0.9
MARK3-210ENST00000556463 PECAM1P16284 738 aaPredicted RBP9.4□□□□□ -0.9
MARK3-210ENST00000556463 CCNE1P24864 410 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 KIF5BP33176 963 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 MAP3K12Q12852 859 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 TCERG1LQ5VWI1 586 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 HGSNATQ68CP4 663 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 LRIG3Q6UXM1 1119 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 KRT26Q7Z3Y9 468 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 SRBD1Q8N5C6 995 aaKnown RBP9.4□□□□□ -0.9
MARK3-210ENST00000556463 LBHD1Q9BQE6 289 aaPredicted RBP9.4□□□□□ -0.9
MARK3-210ENST00000556463 MLXIPQ9HAP2 919 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 MAGEF1Q9HAY2 307 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 TMBIM4Q9HC24 238 aa9.4□□□□□ -0.9
MARK3-210ENST00000556463 ERICH2A1L162 156 aa9.4□□□□□ -0.91
MARK3-210ENST00000556463 MACROD2A1Z1Q3 448 aa9.4□□□□□ -0.91
MARK3-210ENST00000556463 CES2O00748 559 aa9.4□□□□□ -0.91
MARK3-210ENST00000556463 EPHB6O15197 1021 aa9.4□□□□□ -0.91
MARK3-210ENST00000556463 CALM1P0DP23 149 aa9.4□□□□□ -0.91
MARK3-210ENST00000556463 CALM2P0DP24 149 aa9.4□□□□□ -0.91
MARK3-210ENST00000556463 CALM3P0DP25 149 aa9.4□□□□□ -0.91
MARK3-210ENST00000556463 PFKFB3Q16875 520 aaPredicted RBP9.4□□□□□ -0.91
MARK3-210ENST00000556463 ANKRD40Q6AI12 368 aa9.4□□□□□ -0.91
MARK3-210ENST00000556463 PLCB1Q9NQ66 1216 aa9.4□□□□□ -0.91
MARK3-210ENST00000556463 ZNHIT6Q9NWK9 470 aaKnown RBP9.4□□□□□ -0.91
MARK3-210ENST00000556463 SSU72P8A0A1W2PR75 194 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 MOCS3O95396 460 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 CARSP49589 748 aaKnown RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 PDCD2Q16342 344 aaPredicted RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 CYB5D1Q6P9G0 228 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 WHAMMQ8TF30 809 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 P2RX5Q93086 422 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 FAM210AQ96ND0 272 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 C7orf25Q9BPX7 421 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 NACAP1Q9BZK3 213 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 EDEM3Q9BZQ6 932 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 TMX4Q9H1E5 349 aaPredicted RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 CUEDC2Q9H467 287 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 TSKSQ9UJT2 592 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 MAPK8IP1Q9UQF2 711 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.39□□□□□ -0.91
MARK3-210ENST00000556463 SLC4A4Q9Y6R1 1079 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 BAZ2AQ9UIF9 1905 aaKnown RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 PFDN1O60925 122 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 SLC5A1P13866 664 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 NR1D1P20393 614 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 SLC8A1P32418 973 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 KIF11P52732 1056 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 CENPPQ6IPU0 288 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 ADGRA1Q86SQ6 560 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 IFT20Q8IY31 132 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 ESR2Q92731 530 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 ABTB1Q969K4 478 aaPredicted RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 MTMR8Q96EF0 704 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 MS4A4AQ96JQ5 239 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 INPP4AQ96PE3 977 aaPredicted RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 RIOK1Q9BRS2 568 aaKnown RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 IFIH1Q9BYX4 1025 aaKnown RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 OSBPL7Q9BZF2 842 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 ACTR5Q9H9F9 607 aaPredicted RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 SH3GLB2Q9NR46 395 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.39□□□□□ -0.91
MARK3-210ENST00000556463 SCN7AQ01118 1682 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 SMIM22K7EJ46 135 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 PSMA7O14818 248 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 TRAPPC3O43617 180 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 PAX3P23760 479 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 PRPHP41219 470 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 PPP1R2P41236 205 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 HDLBPQ00341 1268 aaKnown RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 XRCC4Q13426 336 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 CDC37Q16543 378 aaPredicted RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 EZH1Q92800 747 aaPredicted RBP9.39□□□□□ -0.91
MARK3-210ENST00000556463 EHD2Q9NZN4 543 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 PCDHGC5Q9Y5F6 944 aa9.39□□□□□ -0.91
MARK3-210ENST00000556463 USO1O60763 962 aaKnown RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 RTN2O75298 545 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 ZPR1O75312 459 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 OATP04181 439 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 VEGFAP15692 232 aaPredicted RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 TRIM21P19474 475 aaKnown RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 INHBEP58166 350 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 RNASE9P60153 205 aaKnown RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 SPRED3Q2MJR0 410 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 HOOK3Q86VS8 718 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 DAGLBQ8NCG7 672 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 CASKIN2Q8WXE0 1202 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 PBXIP1Q96AQ6 731 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms