RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SSBP05455 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
SRP54-211ENST00000556445 MSL3P1P0C860 447 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 YBX1P67809 324 aaKnown RBP6.5□□□□□ -1.37
SRP54-211ENST00000556445 MVKQ03426 396 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 GRB10Q13322 594 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 LAPTM5Q13571 262 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 HLA-DQA1Q5Y7H0 255 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 ATG14Q6ZNE5 492 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 ADAT2Q7Z6V5 191 aaKnown RBP6.5□□□□□ -1.37
SRP54-211ENST00000556445 C1QL4Q86Z23 238 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 CCAR1Q8IX12 1150 aaKnown RBP6.5□□□□□ -1.37
SRP54-211ENST00000556445 CCDC146Q8IYE0 955 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 NME8Q8N427 588 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 NUP43Q8NFH3 380 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 KCNN1Q92952 543 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 GCM1Q9NP62 436 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 TNFRSF12AQ9NP84 129 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 PRKAG3Q9UGI9 489 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 LAS1LQ9Y4W2 734 aaKnown RBP6.5□□□□□ -1.37
SRP54-211ENST00000556445 ARHGEF28Q8N1W1 1705 aaKnown RBP6.5□□□□□ -1.37
SRP54-211ENST00000556445 RIMS2Q9UQ26 1411 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 NLRP1Q9C000 1473 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 LRPPRCP42704 1394 aaKnown RBP6.49□□□□□ -1.37
SRP54-211ENST00000556445 BTBD11A6QL63 1104 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 DNAJC6O75061 913 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 VAMP4O75379 141 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 S100BP04271 92 aaPredicted RBP6.49□□□□□ -1.37
SRP54-211ENST00000556445 ETFBP38117 255 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 TBX4P57082 545 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 DLG4P78352 724 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 CYP4F8P98187 520 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 NCAPHQ15003 741 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 NFE2L2Q16236 605 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 ERICH6BQ5W0A0 696 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 MCF2L2Q86YR7 1114 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 PNISRQ8TF01 805 aaKnown RBP6.49□□□□□ -1.37
SRP54-211ENST00000556445 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.49□□□□□ -1.37
SRP54-211ENST00000556445 ACTR10Q9NZ32 417 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 G3BP2Q9UN86 482 aaKnown RBP6.49□□□□□ -1.37
SRP54-211ENST00000556445 DLC1Q96QB1 1528 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 MYOM1P52179 1685 aa6.49□□□□□ -1.37
SRP54-211ENST00000556445 ALKQ9UM73 1620 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 STXBP3O00186 592 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 STK10O94804 968 aaKnown RBP6.48□□□□□ -1.37
SRP54-211ENST00000556445 CFPP27918 469 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 VIPR1P32241 457 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 ZNF143P52747 638 aaPredicted RBP6.48□□□□□ -1.37
SRP54-211ENST00000556445 DPY19L1Q2PZI1 675 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 CCDC184Q52MB2 194 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 TNNI3KQ59H18 835 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 EEF1DP3Q658K8 133 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 C6orf15Q6UXA7 325 aaPredicted RBP6.48□□□□□ -1.37
SRP54-211ENST00000556445 ANKLE2Q86XL3 938 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 MRFAP1L1Q96HT8 127 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 SGPP1Q9BX95 441 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 SPC25Q9HBM1 224 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 KLHL14Q9P2G3 628 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 MBD1Q9UIS9 605 aaPredicted RBP6.48□□□□□ -1.37
SRP54-211ENST00000556445 SMG5Q9UPR3 1016 aaKnown RBP6.48□□□□□ -1.37
SRP54-211ENST00000556445 EMC9Q9Y3B6 208 aa6.48□□□□□ -1.37
SRP54-211ENST00000556445 YTHDC2Q9H6S0 1430 aaKnown RBP6.48□□□□□ -1.37
SRP54-211ENST00000556445 NSD2O96028 1365 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 TCAF2A6NFQ2 919 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 B2RBV5 119 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 NPIPB6E9PJ23 425 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 ARL4AP40617 200 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 RHBDL3P58872 404 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 AMPD2Q01433 879 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 KCNA10Q16322 511 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 CC2D1BQ5T0F9 858 aaKnown RBP6.47□□□□□ -1.37
SRP54-211ENST00000556445 TMEM132EQ6IEE7 984 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 TSHZ1Q6ZSZ6 1077 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 JAMLQ86YT9 394 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 LRRC56Q8IYG6 542 aaPredicted RBP6.47□□□□□ -1.37
SRP54-211ENST00000556445 TMTC2Q8N394 836 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 NGEFQ8N5V2 710 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 TOX2Q96NM4 488 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 APBA2Q99767 749 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 MAF1Q9H063 256 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 ZNF408Q9H9D4 720 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 POGKQ9P215 609 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 AKT3Q9Y243 479 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 BACE2Q9Y5Z0 518 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 USP32Q8NFA0 1604 aa6.47□□□□□ -1.37
SRP54-211ENST00000556445 ABCC11Q96J66 1382 aa6.46□□□□□ -1.37
SRP54-211ENST00000556445 TBC1D8O95759 1140 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 MPOP05164 745 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 SRSF3P84103 164 aaKnown RBP6.46□□□□□ -1.38
SRP54-211ENST00000556445 CBX2Q14781 532 aaPredicted RBP6.46□□□□□ -1.38
SRP54-211ENST00000556445 C4orf46Q504U0 113 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 LARP1BQ659C4 914 aaKnown RBP6.46□□□□□ -1.38
SRP54-211ENST00000556445 SPOCD1Q6ZMY3 1216 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 FMNL3Q8IVF7 1028 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 FAM178BQ8IXR5 827 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 BVESQ8NE79 360 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 NLGN2Q8NFZ4 835 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 CNTD2Q9H8S5 307 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 EID1Q9Y6B2 187 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 CGNL1Q0VF96 1302 aa6.46□□□□□ -1.38
SRP54-211ENST00000556445 ANKRD36BQ8N2N9 1353 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms