RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 LDHDQ86WU2 507 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 FAM129CQ86XR2 697 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 COL23A1Q86Y22 540 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-240ENST00000556339 JAMLQ86YT9 394 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 BORCS6Q96GS4 357 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 EAF1Q96JC9 268 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-240ENST00000556339 SLC6A18Q96N87 628 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 CNNM2Q9H8M5 875 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 COPRSQ9NQ92 184 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 ERVK13-1Q9NX77 482 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 KLHL14Q9P2G3 628 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 BTAF1O14981 1849 aa5.25□□□□□ -1.57
ATXN3-240ENST00000556339 PCDH11XQ9BZA7 1347 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 PCDH11YQ9BZA8 1340 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 RGPD2P0DJD1 1756 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 A0A1W2PQ45 241 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-240ENST00000556339 A0A1W2PQY0 241 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 CCER2I3L3R5 266 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 IRS4O14654 1257 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-240ENST00000556339 BUB1BO60566 1050 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-240ENST00000556339 ATE1O95260 518 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 PFKLP17858 780 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 APOBRQ0VD83 1088 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 PLEKHO1Q53GL0 409 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-240ENST00000556339 CWF19L1Q69YN2 538 aaKnown RBP5.24□□□□□ -1.57
ATXN3-240ENST00000556339 FBXO33Q7Z6M2 555 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 MORC1Q86VD1 984 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 IFNL2Q8IZJ0 200 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 NLGN1Q8N2Q7 840 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 SYT8Q8NBV8 401 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 ATG4CQ96DT6 458 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 LRRC3Q9BY71 257 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 AP5S1Q9NUS5 200 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 TMOD3Q9NYL9 352 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 IMPACTQ9P2X3 320 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 WNK3Q9BYP7 1800 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 FLT4P35916 1363 aa5.24□□□□□ -1.57
ATXN3-240ENST00000556339 PNPLA7Q6ZV29 1317 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 ABCC6O95255 1503 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 MAP2P11137 1827 aaKnown RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 FAM86C2PA6NEL3 165 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 CYP27B1O15528 508 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 HSPA5P11021 654 aaKnown RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 BMP8BP34820 402 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 ZNF165P49910 485 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 CNGB1Q14028 1251 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 SKOR2Q2VWA4 1001 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 LRRFIP1Q32MZ4 808 aaKnown RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 C1orf141Q5JVX7 400 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 ZC3H14Q6PJT7 736 aaKnown RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 CRTC3Q6UUV7 619 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 DNAJC14Q6Y2X3 702 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 HS2ST1Q7LGA3 356 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 SLCO6A1Q86UG4 719 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 IGDCC3Q8IVU1 814 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 TMEFF1Q8IYR6 380 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 LINC01356Q8N9X3 169 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 ZNF296Q8WUU4 475 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 PIGBQ92521 554 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 ADAM7Q9H2U9 754 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 PANK3Q9H999 370 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 EPB41L4AQ9HCS5 686 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 LUC7LQ9NQ29 371 aaKnown RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 UBP1Q9NZI7 540 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 GGT7Q9UJ14 662 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 JAG2Q9Y219 1238 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 KNSTRNQ9Y448 316 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 RTL1A6NKG5 1358 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 INSRP06213 1382 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 RGPD3A6NKT7 1758 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-240ENST00000556339 RGPD4Q7Z3J3 1758 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 NSD3Q9BZ95 1437 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 WASHC2AQ641Q2 1341 aa5.23□□□□□ -1.57
ATXN3-240ENST00000556339 NHSQ6T4R5 1651 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 ZNF205O95201 554 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 HSP90AB1P08238 724 aaKnown RBP5.22□□□□□ -1.57
ATXN3-240ENST00000556339 GSTM1P09488 218 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 VAV1P15498 845 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 CRKP46108 304 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 LIMS1P48059 325 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 ZNF200P98182 395 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-240ENST00000556339 TAGLNQ01995 201 aaKnown RBP5.22□□□□□ -1.57
ATXN3-240ENST00000556339 NR1I3Q14994 352 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 PLEKHN1Q494U1 663 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-240ENST00000556339 RPTNQ6XPR3 784 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 SMIM5Q71RC9 77 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 ERMP1Q7Z2K6 904 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 CCDC144CPQ8IYA2 1237 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 NLGN2Q8NFZ4 835 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 TEPSINQ96N21 525 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 EHMT1Q9H9B1 1298 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 TNFRSF12AQ9NP84 129 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 POLKQ9UBT6 870 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 DBR1Q9UK59 544 aaKnown RBP5.22□□□□□ -1.57
ATXN3-240ENST00000556339 ASAP1Q9ULH1 1129 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 FAN1Q9Y2M0 1017 aa5.22□□□□□ -1.57
ATXN3-240ENST00000556339 CASZ1Q86V15 1759 aa5.21□□□□□ -1.57
ATXN3-240ENST00000556339 PALLDQ8WX93 1383 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 ZC3H12DA2A288 527 aaKnown RBP5.21□□□□□ -1.58
ATXN3-240ENST00000556339 GREM1O60565 184 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms