RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 KLF18A0A0U1RQI7 1052 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 GOLGA8AA7E2F4 631 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 GOLGA8BA8MQT2 603 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 EFCAB14O75071 495 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 CXCL10P02778 98 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 LGALS2P05162 132 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 ZNF286BP0CG31 522 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 GNAT1P11488 350 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 FUT2Q10981 343 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 BLOC1S2Q6QNY1 142 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 CYFIP1Q7L576 1253 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 HEATR3Q7Z4Q2 680 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 DEFB128Q7Z7B8 93 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 GPKOWQ92917 476 aaPredicted RBP eCLIP14.46□□□□□ -0.09
SNX6-207ENST00000556303 SLC9A7Q96T83 725 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 GPR20Q99678 358 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 AGXT2Q9BYV1 514 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 RIC8AQ9NPQ8 531 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 BARHL2Q9NY43 387 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 ZNF215Q9UL58 517 aaPredicted RBP14.46□□□□□ -0.09
SNX6-207ENST00000556303 PCDHA6Q9UN73 950 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 PCDHA8Q9Y5H6 950 aa14.46□□□□□ -0.09
SNX6-207ENST00000556303 C17orf102A2RUQ5 167 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 ZBBXA8MT70 800 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 CAND2O75155 1236 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 CKBP12277 381 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 FOSL2P15408 326 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 ATP2A2P16615 1042 aaKnown RBP14.45□□□□□ -0.1
SNX6-207ENST00000556303 KCNA4P22459 653 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 METAP2P50579 478 aaKnown RBP eCLIP14.45□□□□□ -0.1
SNX6-207ENST00000556303 GRIN2CQ14957 1233 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 WWC2Q6AWC2 1192 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 MCTP2Q6DN12 878 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 LRRC8DQ7L1W4 858 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 SERINC5Q86VE9 423 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 RAB11FIP4Q86YS3 637 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 DHX38Q92620 1227 aaKnown RBP14.45□□□□□ -0.1
SNX6-207ENST00000556303 JAKMIP1Q96N16 626 aaKnown RBP14.45□□□□□ -0.1
SNX6-207ENST00000556303 FTOQ9C0B1 505 aaKnown RBP eCLIP14.45□□□□□ -0.1
SNX6-207ENST00000556303 SLC28A3Q9HAS3 691 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 JADE2Q9NQC1 790 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 FAM217BQ9NTX9 383 aaPredicted RBP14.45□□□□□ -0.1
SNX6-207ENST00000556303 SNX14Q9Y5W7 946 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 UBIAD1Q9Y5Z9 338 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 V9GY48 417 aaPredicted RBP14.45□□□□□ -0.1
SNX6-207ENST00000556303 TET1Q8NFU7 2136 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 NID2Q14112 1375 aa14.45□□□□□ -0.1
SNX6-207ENST00000556303 EMSYQ7Z589 1322 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 hCG_1642624A0A1W2PR95 340 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 GRXCR1A8MXD5 290 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 KCNA2P16389 499 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 ITGB5P18084 799 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 PBX2P40425 430 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 NAPAP54920 295 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
SNX6-207ENST00000556303 AP3B2Q13367 1082 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 MTMR1Q13613 665 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 TRIM71Q2Q1W2 868 aaKnown RBP14.44□□□□□ -0.1
SNX6-207ENST00000556303 Q6ZUG5 572 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 CCDC12Q8WUD4 166 aaPredicted RBP14.44□□□□□ -0.1
SNX6-207ENST00000556303 MYLIPQ8WY64 445 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 SEPT1Q8WYJ6 367 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 ZFP91Q96JP5 570 aaPredicted RBP14.44□□□□□ -0.1
SNX6-207ENST00000556303 TCEANC2Q96MN5 208 aa14.44□□□□□ -0.1
SNX6-207ENST00000556303 SMCO2A6NFE2 343 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 KIF28PB7ZC32 967 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 STXBP3O00186 592 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 SMIM10L2AP0DMW4 78 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 SMIM10L2BP0DMW5 78 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 RPS6KB1P23443 525 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 CDC27P30260 824 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 ADCY7P51828 1080 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 EVCP57679 992 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 UBE2SQ16763 222 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 PFKFB3Q16875 520 aaPredicted RBP14.43□□□□□ -0.1
SNX6-207ENST00000556303 CNKSR3Q6P9H4 555 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 MAFAQ8NHW3 353 aaPredicted RBP14.43□□□□□ -0.1
SNX6-207ENST00000556303 PPP1R13LQ8WUF5 828 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 TNPO1Q92973 898 aaKnown RBP14.43□□□□□ -0.1
SNX6-207ENST00000556303 ATP6V0A1Q93050 837 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 GAS2L1Q99501 681 aaPredicted RBP14.43□□□□□ -0.1
SNX6-207ENST00000556303 TANC1Q9C0D5 1861 aa14.43□□□□□ -0.1
SNX6-207ENST00000556303 SCN5AQ14524 2016 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 NRCAMQ92823 1304 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 SPTBN5Q9NRC6 3674 aaKnown RBP14.42□□□□□ -0.1
SNX6-207ENST00000556303 ABHD14A-ACY1A0A1B0GW23 586 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 ESYT2A0FGR8 921 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 SORBS3O60504 671 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 RPLP2P05387 115 aaKnown RBP14.42□□□□□ -0.1
SNX6-207ENST00000556303 ADD1P35611 737 aaKnown RBP14.42□□□□□ -0.1
SNX6-207ENST00000556303 CLK2P49760 499 aaKnown RBP14.42□□□□□ -0.1
SNX6-207ENST00000556303 GPNMBQ14956 572 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 BRF1Q92994 677 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 MXRA8Q9BRK3 442 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 RNPEPQ9H4A4 650 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 BCAS3Q9H6U6 928 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 KAT6AQ92794 2004 aa14.42□□□□□ -0.1
SNX6-207ENST00000556303 NFASCO94856 1347 aa14.41□□□□□ -0.1
SNX6-207ENST00000556303 PRPF3O43395 683 aaKnown RBP14.41□□□□□ -0.1
SNX6-207ENST00000556303 NBNO60934 754 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms