RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 SEMA6BQ9H3T3 888 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 RPAP3Q9H6T3 665 aaPredicted RBP11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 UQCRHLA0A096LP55 91 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 A0A1W2PQC6 194 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 LGALS16A8MUM7 142 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 C19orf81C9J6K1 198 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 MEIS1O00470 390 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 PES1O00541 588 aaKnown RBP11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 PSMD10O75832 226 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 UQCRHP07919 91 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 ALAS1P13196 640 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 CYP11B2P19099 503 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 DNM2P50570 870 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 UBXN2AP68543 259 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 GHRHRQ02643 423 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 PPP2R5CQ13362 524 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 SUPT20HL1Q3ZLR7 823 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 FAM26FQ5R3K3 315 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 MYOCDQ8IZQ8 938 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 MYRIPQ8NFW9 859 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 TRPM4Q8TD43 1214 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 CLEC4DQ8WXI8 215 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 SLC5A5Q92911 643 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 PPP1R13BQ96KQ4 1090 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 TSG101Q99816 390 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 EIF2AK1Q9BQI3 630 aaKnown RBP11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 TUBGCP2Q9BSJ2 902 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 ZNF577Q9BSK1 485 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 WDR11Q9BZH6 1224 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 RAVER2Q9HCJ3 691 aaKnown RBP11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 GGA3Q9NZ52 723 aa11.23□□□□□ -0.61
EFCAB11-209ENST00000556005 GAS7O60861 476 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 MFAP3LO75121 409 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 MUTP22033 750 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 CASP14P31944 242 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 HERC4Q5GLZ8 1057 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 PRAMEF18Q5VWM3 479 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 KLRG1Q96E93 195 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 CNOT6LQ96LI5 555 aaKnown RBP11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 MXRA8Q9BRK3 442 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 TUFT1Q9NNX1 390 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 ZHX2Q9Y6X8 837 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 SMCHD1A6NHR9 2005 aa11.22□□□□□ -0.61
EFCAB11-209ENST00000556005 FRMD3A2A2Y4 597 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 NFIBO00712 420 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 GYPCP04921 128 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 BCRP11274 1271 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 EPS15P42566 896 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 MTIF2P46199 727 aaKnown RBP11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 PABPC4Q13310 644 aaKnown RBP eCLIP11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 DGKZQ13574 1117 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 ZNF507Q8TCN5 953 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 RIT2Q99578 217 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 HSD17B14Q9BPX1 270 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 NOC4LQ9BVI4 516 aaKnown RBP11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 UTRNP46939 3433 aa11.21□□□□□ -0.61
EFCAB11-209ENST00000556005 RPTORQ8N122 1335 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 GOLGA6L9A6NEM1 432 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 EML1O00423 815 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 VWA5AO00534 786 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 SLITRK3O94933 977 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 EYA4O95677 639 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 HIRAP54198 1017 aaPredicted RBP11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 PSMC6P62333 389 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 CYP4A11Q02928 519 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 ARSHQ5FYA8 562 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 NIPA1Q7RTP0 329 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 KIF18AQ8NI77 898 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 ZNF592Q92610 1267 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 C12orf42Q96LP6 360 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 NUP58Q9BVL2 599 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 TEKT3Q9BXF9 490 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 PCDHA2Q9Y5H9 948 aa11.21□□□□□ -0.62
EFCAB11-209ENST00000556005 NPHP3-ACAD11A0A0J9YXS1 232 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 B4DLN1 442 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 IPO5O00410 1097 aaKnown RBP11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 CHMP2AO43633 222 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 ARP10275 920 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 KCNA4P22459 653 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 GTF2F1P35269 517 aaKnown RBP eCLIP11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 FXR1P51114 621 aaKnown RBP eCLIP11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 FKBP3Q00688 224 aaKnown RBP11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 TBC1D8BQ0IIM8 1120 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 GIT2Q14161 759 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 LRRC41Q15345 812 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 FKBP15Q5T1M5 1219 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 PCNX4Q63HM2 1172 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 TPH2Q8IWU9 490 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 SYTL5Q8TDW5 730 aaPredicted RBP11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 EEF2KMTQ96G04 330 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 TRERF1Q96PN7 1200 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 FHDC1Q9C0D6 1143 aaPredicted RBP11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 BHMT2Q9H2M3 363 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 ZHX3Q9H4I2 956 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 HOMER2Q9NSB8 354 aa11.2□□□□□ -0.62
EFCAB11-209ENST00000556005 RGL1Q9NZL6 768 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms