RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PNMA5Q96PV4 448 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 TEKT3Q9BXF9 490 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 ARHGAP39Q9C0H5 1083 aa11.48□□□□□ -0.57
SRP54-208ENST00000555557 MED24O75448 989 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 CASP1P29466 404 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 CCT6AP40227 531 aaKnown RBP11.47□□□□□ -0.57
SRP54-208ENST00000555557 STAT6P42226 847 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 AFMP43652 599 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 CYP4A11Q02928 519 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 PNOCQ13519 176 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 NAALADL2Q58DX5 795 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 FBXO16Q8IX29 292 aaPredicted RBP11.47□□□□□ -0.57
SRP54-208ENST00000555557 IQUBQ8NA54 791 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 NPLOC4Q8TAT6 608 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 TIGD1Q96MW7 591 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 RIT2Q99578 217 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 RGL1Q9NZL6 768 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 CCDC39Q9UFE4 941 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 TELO2Q9Y4R8 837 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 SLC15A5A6NIM6 579 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 SPATA31C2B4DYI2 1134 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 STAM2O75886 525 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 SLFN14P0C7P3 912 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 KCNA2P16389 499 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 PPP2R5CQ13362 524 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 GNPTABQ3T906 1256 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 MORN1Q5T089 497 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 PDXDC2PQ6P474 469 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 B3GNT9Q6UX72 402 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 ARMCX2Q7L311 632 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 CATSPER3Q86XQ3 398 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 CEP57L1Q8IYX8 460 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 CALML4Q96GE6 196 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 MTRQ99707 1265 aa11.47□□□□□ -0.57
SRP54-208ENST00000555557 POTEB3A0JP26 581 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 MAFGO15525 162 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 SPATA31C1P0DKV0 1188 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 MAP2K2P36507 400 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 MDM2Q00987 491 aaPredicted RBP11.46□□□□□ -0.58
SRP54-208ENST00000555557 SP4Q02446 784 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 POTEBQ6S5H4 581 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 KCNK18Q7Z418 384 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 PAGE5Q96GU1 130 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 CDK5RAP3Q96JB5 506 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 MAML3Q96JK9 1138 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 EIF2AK1Q9BQI3 630 aaKnown RBP11.46□□□□□ -0.58
SRP54-208ENST00000555557 PDGFCQ9NRA1 345 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 TBC1D22BQ9NU19 505 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 RNF186Q9NXI6 227 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 KIAA1024Q9UPX6 916 aa11.46□□□□□ -0.58
SRP54-208ENST00000555557 ZNFX1Q9P2E3 1918 aaKnown RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 POTEFA5A3E0 1075 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 ASB14A6NK59 587 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 B4DLN1 442 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 TNPO2O14787 897 aaKnown RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 CCNE2O96020 404 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 CYP2B6P20813 491 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 CAP1Q01518 475 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 MAP2K5Q13163 448 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 CTTNQ14247 550 aaKnown RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 DHX8Q14562 1220 aaKnown RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 LY6KQ17RY6 165 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 TMEM63BQ5T3F8 832 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 RBM43Q6ZSC3 357 aaKnown RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 GAS2L3Q86XJ1 694 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 MORC4Q8TE76 937 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 DYDC2Q96IM9 177 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 CDHR1Q96JP9 859 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 MPHOSPH6Q99547 160 aaKnown RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 SAMM50Q9Y512 469 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 E9PMD0 336 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 CTAGE5O15320 804 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 SLITRK3O94933 977 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 LETM1O95202 739 aaPredicted RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 ARIH2O95376 493 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 SNAI1O95863 264 aaPredicted RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 PTGS1P23219 599 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 RPA1P27694 616 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 ICAM3P32942 547 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 PSMC4P43686 418 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 ZNF445P59923 1031 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 PSMC6P62333 389 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 LACTBP83111 547 aaPredicted RBP11.45□□□□□ -0.58
SRP54-208ENST00000555557 POSTNQ15063 836 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 TMEM119Q4V9L6 283 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 HAUS3Q68CZ6 603 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 ISM2Q6H9L7 571 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 CYFIP1Q7L576 1253 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 MIER3Q7Z3K6 550 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 SH3RF1Q7Z6J0 888 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 TPH2Q8IWU9 490 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 ERMNQ8TAM6 284 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 HSD17B14Q9BPX1 270 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 BLZF1Q9H2G9 400 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 BLOC1S4Q9NUP1 217 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 FLRT1Q9NZU1 646 aa11.45□□□□□ -0.58
SRP54-208ENST00000555557 KIAA1468Q9P260 1216 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms