RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 HEATR6Q6AI08 1181 aaKnown RBP7.72□□□□□ -1.17
VRK1-205ENST00000555402 PPP1R14AQ96A00 147 aa7.72□□□□□ -1.17
VRK1-205ENST00000555402 ZNF669Q96BR6 464 aaPredicted RBP7.72□□□□□ -1.17
VRK1-205ENST00000555402 EPN3Q9H201 632 aa7.72□□□□□ -1.17
VRK1-205ENST00000555402 IQCA1LA6NCM1 817 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
VRK1-205ENST00000555402 CYP1A1P04798 512 aaPredicted RBP7.71□□□□□ -1.18
VRK1-205ENST00000555402 ZNF28P17035 718 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 PPP2CBP62714 309 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 PPP2CAP67775 309 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 R3HDM1Q15032 1099 aaKnown RBP7.71□□□□□ -1.18
VRK1-205ENST00000555402 SLC10A6Q3KNW5 377 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 PRAMEF18Q5VWM3 479 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 ADAT2Q7Z6V5 191 aaKnown RBP7.71□□□□□ -1.18
VRK1-205ENST00000555402 LRRC47Q8N1G4 583 aaKnown RBP7.71□□□□□ -1.18
VRK1-205ENST00000555402 IGDCC4Q8TDY8 1250 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 APBA2Q99767 749 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 KLHL25Q9H0H3 589 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 GBP3Q9H0R5 595 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 SLKQ9H2G2 1235 aaPredicted RBP7.71□□□□□ -1.18
VRK1-205ENST00000555402 LRP2BPQ9P2M1 347 aa7.71□□□□□ -1.18
VRK1-205ENST00000555402 ING1Q9UK53 422 aaPredicted RBP7.71□□□□□ -1.18
VRK1-205ENST00000555402 ANKRD34BA5PLL1 514 aa7.7□□□□□ -1.18
VRK1-205ENST00000555402 EPHX1P07099 455 aa7.7□□□□□ -1.18
VRK1-205ENST00000555402 EPHB4P54760 987 aa7.7□□□□□ -1.18
VRK1-205ENST00000555402 ARHGEF39Q8N4T4 335 aa7.7□□□□□ -1.18
VRK1-205ENST00000555402 DPF3Q92784 378 aa7.7□□□□□ -1.18
VRK1-205ENST00000555402 MBD6Q96DN6 1003 aa7.7□□□□□ -1.18
VRK1-205ENST00000555402 WWC2-AS2Q96NR7 200 aa7.7□□□□□ -1.18
VRK1-205ENST00000555402 SPATA9Q9BWV2 254 aa7.7□□□□□ -1.18
VRK1-205ENST00000555402 MARCH2Q9P0N8 246 aa7.7□□□□□ -1.18
VRK1-205ENST00000555402 CGGBP1Q9UFW8 167 aaPredicted RBP7.7□□□□□ -1.18
VRK1-205ENST00000555402 PPM1BO75688 479 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 ZNF143P52747 638 aaPredicted RBP7.69□□□□□ -1.18
VRK1-205ENST00000555402 GRB10Q13322 594 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 ADAM9Q13443 819 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 SQSTM1Q13501 440 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 FAM126BQ8IXS8 530 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 SEC14L1Q92503 715 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 FGD4Q96M96 766 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 NGRNQ9NPE2 291 aaKnown RBP7.69□□□□□ -1.18
VRK1-205ENST00000555402 JADE2Q9NQC1 790 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 TMEM260Q9NX78 707 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 SUGT1Q9Y2Z0 365 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 PTCH2Q9Y6C5 1203 aa7.69□□□□□ -1.18
VRK1-205ENST00000555402 IL13P35225 146 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 STAT5AP42229 794 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 SELENOPP49908 381 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 CR1LQ2VPA4 569 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 PLEKHG4Q58EX7 1191 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 SPDYAQ5MJ70 313 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 RNF187Q5TA31 235 aaPredicted RBP7.68□□□□□ -1.18
VRK1-205ENST00000555402 MBLAC2Q68D91 279 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 ARHGEF18Q6ZSZ5 1173 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 MILR1Q7Z6M3 343 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 ZSWIM2Q8NEG5 633 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 RCC1LQ96I51 464 aaKnown RBP7.68□□□□□ -1.18
VRK1-205ENST00000555402 YTHDC1Q96MU7 727 aaKnown RBP7.68□□□□□ -1.18
VRK1-205ENST00000555402 TMEM168Q9H0V1 697 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 L2HGDHQ9H9P8 463 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 CLEC1BQ9P126 229 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 TCAF1Q9Y4C2 921 aa7.68□□□□□ -1.18
VRK1-205ENST00000555402 PATE3B3GLJ2 98 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 MUSKO15146 869 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 FAM153BP0C7A2 387 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 TAF7LQ5H9L4 462 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 PKN3Q6P5Z2 889 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 C16orf86Q6ZW13 317 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 MMP19Q99542 508 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 PTPN18Q99952 460 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 SEMA4AQ9H3S1 761 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 TESMINQ9Y4I5 508 aa7.67□□□□□ -1.18
VRK1-205ENST00000555402 C22orf46C9J442 243 aa7.66□□□□□ -1.18
VRK1-205ENST00000555402 SLFN13Q68D06 897 aa7.66□□□□□ -1.18
VRK1-205ENST00000555402 TEX2Q8IWB9 1127 aa7.66□□□□□ -1.18
VRK1-205ENST00000555402 KBTBD2Q8IY47 623 aa7.66□□□□□ -1.18
VRK1-205ENST00000555402 ZBTB38Q8NAP3 1195 aaPredicted RBP7.66□□□□□ -1.18
VRK1-205ENST00000555402 SGSM3Q96HU1 749 aa7.66□□□□□ -1.18
VRK1-205ENST00000555402 IPO9Q96P70 1041 aaKnown RBP7.66□□□□□ -1.18
VRK1-205ENST00000555402 CDC6Q99741 560 aa7.66□□□□□ -1.18
VRK1-205ENST00000555402 NOP56O00567 594 aaKnown RBP7.65□□□□□ -1.18
VRK1-205ENST00000555402 PPP1R12AO14974 1030 aaPredicted RBP7.65□□□□□ -1.18
VRK1-205ENST00000555402 ZNF623O75123 536 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 ASMTLO95671 621 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 THBDP07204 575 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 PLS3P13797 630 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 SLC6A11P48066 632 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 NKX3-2P78367 333 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 TCEA2Q15560 299 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 JMYQ8N9B5 988 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 COPS5Q92905 334 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 GPRC5CQ9NQ84 441 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 BTG4Q9NY30 223 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 APEX2Q9UBZ4 518 aa7.65□□□□□ -1.18
VRK1-205ENST00000555402 A0A1W2PQU0 124 aa7.64□□□□□ -1.19
VRK1-205ENST00000555402 MLLT6P55198 1093 aaPredicted RBP7.64□□□□□ -1.19
VRK1-205ENST00000555402 TGFB2P61812 414 aa7.64□□□□□ -1.19
VRK1-205ENST00000555402 HSP90AA2PQ14568 343 aaPredicted RBP7.64□□□□□ -1.19
VRK1-205ENST00000555402 LONRF2Q1L5Z9 754 aa7.64□□□□□ -1.19
VRK1-205ENST00000555402 ANKRD13AQ8IZ07 590 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms