RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 TRIM49CP0CI26 452 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 DPYDQ12882 1025 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 TRAF1Q13077 416 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 BMS1Q14692 1282 aaKnown RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 E4F1Q66K89 784 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 CEP170P1Q96L14 293 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 WDR24Q96S15 920 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 RPAP3Q9H6T3 665 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 ARFGAP3Q9NP61 516 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 HDAC6Q9UBN7 1215 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 ROBO1Q9Y6N7 1651 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 AFDNP55196 1824 aaKnown RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 PLEKHG2Q9H7P9 1386 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 GOLGA6L9A6NEM1 432 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 PSMC6P62333 389 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 LMBRD2Q68DH5 695 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 ZNF579Q8NAF0 562 aaKnown RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 DDNO94850 711 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 KRT19P08727 400 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 TMED8Q6PL24 325 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 RNF207Q6ZRF8 634 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 SLFN12Q8IYM2 578 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 FNBP1Q96RU3 617 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 NDST4Q9H3R1 872 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 IPO5O00410 1097 aaKnown RBP13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 COASYQ13057 564 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 DCAF15Q66K64 600 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 PPP1R18Q6NYC8 613 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 KCNK18Q7Z418 384 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 TEX2Q8IWB9 1127 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 PPP1R13LQ8WUF5 828 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 RNF146Q9NTX7 359 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 RWDD2AQ9UIY3 292 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 TUBE1Q9UJT0 475 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 HPSEQ9Y251 543 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 NPEPPSP55786 919 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 KIAA0753Q2KHM9 967 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 DPY19L2Q6NUT2 758 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 TAB3Q8N5C8 712 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 ATG4CQ96DT6 458 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 ZCCHC17Q9NP64 241 aaKnown RBP13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 NFIBO00712 420 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 WNT10BO00744 389 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 FTCDO95954 541 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 CCZ1BP86790 482 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 CCZ1P86791 482 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 FKBP3Q00688 224 aaKnown RBP13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 BAATQ14032 418 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 NCAPHQ15003 741 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 ASIC2Q16515 512 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 IL17AQ16552 155 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 SLC9C1Q4G0N8 1177 aa13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF40-206ENST00000555232 A0A0U1RQJ8 604 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 A0A1W2PRG0 241 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 EIF4A3P38919 411 aaKnown RBP13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 SFMBT2Q5VUG0 894 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 ATRIPQ8WXE1 791 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 AK8Q96MA6 479 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 KIFC3Q9BVG8 833 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 HNRNPDLO14979 420 aaKnown RBP13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 GFPT2O94808 682 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 ACTN1P12814 892 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 EHHADHQ08426 723 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 PLA2G4FQ68DD2 849 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 GOLGA1Q92805 767 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 ZDHHC15Q96MV8 337 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 GLT8D2Q9H1C3 349 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 IKZF4Q9H2S9 585 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 ELP3Q9H9T3 547 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 PACSIN2Q9UNF0 486 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 COL4A3BPQ9Y5P4 624 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 EGFRP00533 1210 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 FOSP01100 380 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 LMAN1P49257 510 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 SOX10P56693 466 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 MTMR1Q13613 665 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 RIC8AQ9NPQ8 531 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 SH3GLB2Q9NR46 395 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 USTQ9Y2C2 406 aa13.43□□□□□ -0.26
ARHGEF40-206ENST00000555232 SLC16A4O15374 487 aa13.42□□□□□ -0.26
ARHGEF40-206ENST00000555232 CEP104O60308 925 aa13.42□□□□□ -0.26
ARHGEF40-206ENST00000555232 STX10O60499 249 aa13.42□□□□□ -0.26
ARHGEF40-206ENST00000555232 SRGAP2CP0DJJ0 459 aa13.42□□□□□ -0.26
ARHGEF40-206ENST00000555232 SMTNP53814 917 aa13.42□□□□□ -0.26
ARHGEF40-206ENST00000555232 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
ARHGEF40-206ENST00000555232 SARM1Q6SZW1 724 aa13.42□□□□□ -0.26
ARHGEF40-206ENST00000555232 CDR2LQ86X02 465 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF40-206ENST00000555232 MB21D1Q8N884 522 aa13.42□□□□□ -0.26
ARHGEF40-206ENST00000555232 POMGNT1Q8WZA1 660 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms