RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 ERLIN2O94905 339 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 PSMD2Q13200 908 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 PDIA5Q14554 519 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 TMEM119Q4V9L6 283 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 CASKIN2Q8WXE0 1202 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 PIK3R5Q8WYR1 880 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 RIOX1Q9H6W3 641 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 ZNF287Q9HBT7 754 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 RNF14Q9UBS8 474 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 ATP6V0A2Q9Y487 856 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 A0A087X0T9 212 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 ZEB2O60315 1214 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 FAM228BP0C875 321 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 PAK2Q13177 524 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 FAM182BQ5T319 152 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 PROM2Q8N271 834 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 UIMC1Q96RL1 719 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.28■□□□□ 0.52
XRCC3-209ENST00000554913 RAB34Q9BZG1 259 aa18.28■□□□□ 0.52
XRCC3-209ENST00000554913 NDUFAB1O14561 156 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 SSBP05455 408 aaKnown RBP eCLIP18.27■□□□□ 0.52
XRCC3-209ENST00000554913 TNNI2P48788 182 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 ADCY7P51828 1080 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 NELFCDQ8IXH7 590 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 RNPC3Q96LT9 517 aaKnown RBP18.27■□□□□ 0.52
XRCC3-209ENST00000554913 ADAMTS1Q9UHI8 967 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 SMARCA1P28370 1054 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 GTF2A1P52655 376 aaPredicted RBP18.27■□□□□ 0.52
XRCC3-209ENST00000554913 RAPGEF1Q13905 1077 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 NFIXQ14938 502 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 KIAA0753Q2KHM9 967 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 MEI1Q5TIA1 1274 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 TEX11Q8IYF3 940 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 SYN2Q92777 582 aaPredicted RBP18.27■□□□□ 0.52
XRCC3-209ENST00000554913 INPP4AQ96PE3 977 aaPredicted RBP18.27■□□□□ 0.52
XRCC3-209ENST00000554913 PANK4Q9NVE7 773 aa18.27■□□□□ 0.52
XRCC3-209ENST00000554913 NAV1Q8NEY1 1877 aa18.27■□□□□ 0.51
XRCC3-209ENST00000554913 LDHCP07864 332 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 PDHBP11177 359 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 GUCY1A3Q02108 690 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 SLC18A3Q16572 532 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 UBE2SQ16763 222 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 FAM26FQ5R3K3 315 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 TPTE2Q6XPS3 522 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 FAM133AQ8N9E0 248 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-209ENST00000554913 CERS3Q8IU89 383 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 NUCKS1Q9H1E3 243 aaKnown RBP18.26■□□□□ 0.51
XRCC3-209ENST00000554913 NARFQ9UHQ1 456 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 PCDHGC5Q9Y5F6 944 aa18.26■□□□□ 0.51
XRCC3-209ENST00000554913 GRID2IPA4D2P6 1211 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 HAS1Q92839 578 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 LRRC27Q9C0I9 530 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.25■□□□□ 0.51
XRCC3-209ENST00000554913 COL5A3P25940 1745 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-209ENST00000554913 RAD51CO43502 376 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 KLHL30Q0D2K2 578 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 CDC37Q16543 378 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-209ENST00000554913 FBXW10Q5XX13 1052 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 KDM7AQ6ZMT4 941 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 TRIM59Q8IWR1 403 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 KLHL7Q8IXQ5 586 aa18.25■□□□□ 0.51
XRCC3-209ENST00000554913 LRRC47Q8N1G4 583 aaKnown RBP18.25■□□□□ 0.51
XRCC3-209ENST00000554913 LUC7LQ9NQ29 371 aaKnown RBP18.25■□□□□ 0.51
XRCC3-209ENST00000554913 NPHP3-ACAD11A0A0J9YXS1 232 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 INPP5BP32019 993 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 LSP1P33241 339 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 EIF6P56537 245 aaKnown RBP18.24■□□□□ 0.51
XRCC3-209ENST00000554913 VPS72Q15906 364 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 FOXR2Q6PJQ5 311 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 CLEC10AQ8IUN9 316 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 MREGQ8N565 214 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 GPCPD1Q9NPB8 672 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 DDX60LQ5H9U9 1706 aaKnown RBP18.24■□□□□ 0.51
XRCC3-209ENST00000554913 E9PMD0 336 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 MMS22LQ6ZRQ5 1243 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 DNAAF5Q86Y56 855 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 GOLPH3Q9H4A6 298 aa18.24■□□□□ 0.51
XRCC3-209ENST00000554913 KCTD19Q17RG1 926 aaPredicted RBP18.23■□□□□ 0.51
XRCC3-209ENST00000554913 USP38Q8NB14 1042 aa18.23■□□□□ 0.51
XRCC3-209ENST00000554913 DDX25Q9UHL0 483 aaKnown RBP18.23■□□□□ 0.51
XRCC3-209ENST00000554913 GPR75-ASB3A0A0A6YYF3 556 aa18.23■□□□□ 0.51
XRCC3-209ENST00000554913 A6NNZ2 444 aa18.23■□□□□ 0.51
XRCC3-209ENST00000554913 NR1D1P20393 614 aa18.23■□□□□ 0.51
XRCC3-209ENST00000554913 SF3B2Q13435 895 aaKnown RBP18.23■□□□□ 0.51
XRCC3-209ENST00000554913 PTPROQ16827 1216 aa18.23■□□□□ 0.51
XRCC3-209ENST00000554913 TUBB8Q3ZCM7 444 aa18.23■□□□□ 0.51
XRCC3-209ENST00000554913 CEP63Q96MT8 703 aa18.23■□□□□ 0.51
XRCC3-209ENST00000554913 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
XRCC3-209ENST00000554913 PCDHA2Q9Y5H9 948 aa18.23■□□□□ 0.51
XRCC3-209ENST00000554913 MARCH6O60337 910 aa18.22■□□□□ 0.51
XRCC3-209ENST00000554913 NOVP48745 357 aa18.22■□□□□ 0.51
XRCC3-209ENST00000554913 ASIC2Q16515 512 aa18.22■□□□□ 0.51
XRCC3-209ENST00000554913 ZNF804AQ7Z570 1209 aa18.22■□□□□ 0.51
XRCC3-209ENST00000554913 CD302Q8IX05 232 aa18.22■□□□□ 0.51
XRCC3-209ENST00000554913 PROCA1Q8NCQ7 364 aaPredicted RBP18.22■□□□□ 0.51
XRCC3-209ENST00000554913 SCFD1Q8WVM8 642 aa18.22■□□□□ 0.51
XRCC3-209ENST00000554913 GANQ9H2C0 597 aa18.22■□□□□ 0.51
XRCC3-209ENST00000554913 AIPL1Q9NZN9 384 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms