RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 SF3A1Q15459 793 aaKnown RBP7.07□□□□□ -1.28
LINC01550-204ENST00000554822 TESK1Q15569 626 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 MTERF2Q49AM1 385 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 CIAPIN1Q6FI81 312 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 USP53Q70EK8 1073 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 CEP68Q76N32 757 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 LRRC47Q8N1G4 583 aaKnown RBP7.07□□□□□ -1.28
LINC01550-204ENST00000554822 PMFBP1Q8TBY8 1022 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 CHAMP1Q96JM3 812 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 SPATA9Q9BWV2 254 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 PCDHA2Q9Y5H9 948 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 KIF15Q9NS87 1388 aa7.07□□□□□ -1.28
LINC01550-204ENST00000554822 IRS2Q9Y4H2 1338 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 IRS4O14654 1257 aaPredicted RBP7.06□□□□□ -1.28
LINC01550-204ENST00000554822 MYO1BO43795 1136 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 BUB1BO60566 1050 aaPredicted RBP7.06□□□□□ -1.28
LINC01550-204ENST00000554822 PABPC1P11940 636 aaKnown RBP7.06□□□□□ -1.28
LINC01550-204ENST00000554822 HNRNPMP52272 730 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC01550-204ENST00000554822 EFCAB2Q5VUJ9 269 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 NSMFQ6X4W1 530 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 NLRP10Q86W26 655 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 TMEFF1Q8IYR6 380 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 ZSCAN18Q8TBC5 510 aaPredicted RBP7.06□□□□□ -1.28
LINC01550-204ENST00000554822 OSBP2Q969R2 916 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 TRMT2BQ96GJ1 504 aaKnown RBP7.06□□□□□ -1.28
LINC01550-204ENST00000554822 PEX11GQ96HA9 241 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 EPB41L4AQ9HCS5 686 aaPredicted RBP7.06□□□□□ -1.28
LINC01550-204ENST00000554822 NUDT5Q9UKK9 219 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 NPFFR2Q9Y5X5 522 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 YEATS2Q9ULM3 1422 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 DUOX2Q9NRD8 1548 aa7.06□□□□□ -1.28
LINC01550-204ENST00000554822 STRCQ7RTU9 1775 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 TRAV20A0A0B4J274 112 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 BLACEA4D250 179 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 FAM221BA6H8Z2 402 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 DIAPH1O60610 1272 aaKnown RBP7.05□□□□□ -1.28
LINC01550-204ENST00000554822 FGFR1P11362 822 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 FBLN1P23142 703 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 SSRP1Q08945 709 aaKnown RBP7.05□□□□□ -1.28
LINC01550-204ENST00000554822 LSAMPQ13449 338 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 ZNF385BQ569K4 471 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 ALG3Q92685 438 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 ZNF669Q96BR6 464 aaPredicted RBP7.05□□□□□ -1.28
LINC01550-204ENST00000554822 TMEM169Q96HH4 297 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 ARHGEF12Q9NZN5 1544 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 IQGAP3Q86VI3 1631 aa7.05□□□□□ -1.28
LINC01550-204ENST00000554822 TEX14Q8IWB6 1497 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 CFAP74Q9C0B2 1584 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 RTEL1-TNFRSF6BF6WH68 1400 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 ERBINQ96RT1 1412 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 MSCO60682 206 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 ZSCAN22P10073 491 aaPredicted RBP7.04□□□□□ -1.28
LINC01550-204ENST00000554822 ATF2P15336 505 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 MC3RP41968 323 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 GTF2A2P52657 109 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 RASA3Q14644 834 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 NTRK3Q16288 839 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 SREK1Q8WXA9 508 aaKnown RBP7.04□□□□□ -1.28
LINC01550-204ENST00000554822 TSPAN17Q96FV3 270 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 DEPDC7Q96QD5 511 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 DNAJC2Q99543 621 aaKnown RBP7.04□□□□□ -1.28
LINC01550-204ENST00000554822 X6R8D5 127 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 MAGI2Q86UL8 1455 aa7.04□□□□□ -1.28
LINC01550-204ENST00000554822 ASXL2Q76L83 1435 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 RFXAPO00287 272 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 SGSM2O43147 1006 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 ADCY3O60266 1144 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 IGSF3O75054 1194 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 ASGR2P07307 311 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 PFKLP17858 780 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 IGFBP6P24592 240 aaPredicted RBP7.03□□□□□ -1.28
LINC01550-204ENST00000554822 PMLP29590 882 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 LCNL1Q6ZST4 164 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 FAM129CQ86XR2 697 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 PHF20Q9BVI0 1012 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 CLDND1Q9NY35 253 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 SNTG2Q9NY99 539 aa7.03□□□□□ -1.28
LINC01550-204ENST00000554822 INO80Q9ULG1 1556 aaPredicted RBP7.03□□□□□ -1.28
LINC01550-204ENST00000554822 KDM2BQ8NHM5 1336 aa7.02□□□□□ -1.28
LINC01550-204ENST00000554822 FAM135AQ9P2D6 1515 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 POLR1AO95602 1720 aaPredicted RBP7.02□□□□□ -1.29
LINC01550-204ENST00000554822 CEP350Q5VT06 3117 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 ZBTB7AO95365 584 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 FAM153BP0C7A2 387 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 NCAM1P13591 858 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 LIMS1P48059 325 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 IFRD2Q12894 506 aaPredicted RBP7.02□□□□□ -1.29
LINC01550-204ENST00000554822 SLC9A5Q14940 896 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 TARBP2Q15633 366 aaKnown RBP7.02□□□□□ -1.29
LINC01550-204ENST00000554822 SOGA3Q5TF21 947 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 MROH9Q5TGP6 573 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 FOXB2Q5VYV0 432 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 CNKSR3Q6P9H4 555 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 DCP2Q8IU60 420 aaKnown RBP7.02□□□□□ -1.29
LINC01550-204ENST00000554822 Q8N1Y9 231 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 SRPK1Q96SB4 655 aaKnown RBP7.02□□□□□ -1.29
LINC01550-204ENST00000554822 AP5M1Q9H0R1 490 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 GPR27Q9NS67 375 aa7.02□□□□□ -1.29
LINC01550-204ENST00000554822 COA3Q9Y2R0 106 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms