RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 INF2Q27J81 1249 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 CCDC62Q6P9F0 684 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 KCNV1Q6PIU1 500 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 DHX37Q8IY37 1157 aaKnown RBP11.29□□□□□ -0.6
LETMD1-234ENST00000552645 DIS3L2Q8IYB7 885 aaKnown RBP11.29□□□□□ -0.6
LETMD1-234ENST00000552645 VTI1AQ96AJ9 217 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 SENP6Q9GZR1 1112 aaPredicted RBP11.29□□□□□ -0.6
LETMD1-234ENST00000552645 DDX41Q9UJV9 622 aaKnown RBP11.29□□□□□ -0.6
LETMD1-234ENST00000552645 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 SPATA31C2B4DYI2 1134 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 H3BQV1 296 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
LETMD1-234ENST00000552645 UBA1P22314 1058 aaKnown RBP11.28□□□□□ -0.6
LETMD1-234ENST00000552645 ATN1P54259 1190 aaPredicted RBP11.28□□□□□ -0.6
LETMD1-234ENST00000552645 SP2Q02086 613 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 CEP55Q53EZ4 464 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 PRR16Q569H4 304 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 MCTP1Q6DN14 999 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 ANKLE1Q8NAG6 615 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 MXRA8Q9BRK3 442 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 C11orf49Q9H6J7 331 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 BCAS3Q9H6U6 928 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 MLXIPQ9HAP2 919 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 JADE2Q9NQC1 790 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 UBIAD1Q9Y5Z9 338 aa11.28□□□□□ -0.6
LETMD1-234ENST00000552645 FAM86B1E9PN63 330 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 M0R2N6 131 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 ASGR1P07306 291 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 MYL3P08590 195 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 FAM86B2P0C5J1 330 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 ARP10275 920 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 TGFB3P10600 412 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 ATP2B1P20020 1258 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 CPT1AP50416 773 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 ACLYP53396 1101 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 ARHGAP1Q07960 439 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 CUL4AQ13619 759 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 LETM2Q2VYF4 491 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 BRDTQ58F21 947 aaPredicted RBP11.27□□□□□ -0.6
LETMD1-234ENST00000552645 CYFIP1Q7L576 1253 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 PLA2G4DQ86XP0 818 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 PCSK9Q8NBP7 692 aaKnown RBP11.27□□□□□ -0.6
LETMD1-234ENST00000552645 FBXO18Q8NFZ0 1043 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 GPRASP2Q96D09 838 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 CDHR1Q96JP9 859 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 SPATA33Q96N06 139 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 UPF3AQ9H1J1 476 aaKnown RBP11.27□□□□□ -0.6
LETMD1-234ENST00000552645 KCNH7Q9NS40 1196 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 Q9Y3F1 56 aa11.27□□□□□ -0.6
LETMD1-234ENST00000552645 DDX39AO00148 427 aaKnown RBP11.27□□□□□ -0.61
LETMD1-234ENST00000552645 NOP56O00567 594 aaKnown RBP11.27□□□□□ -0.61
LETMD1-234ENST00000552645 CTAGE5O15320 804 aa11.27□□□□□ -0.61
LETMD1-234ENST00000552645 ZEB2O60315 1214 aa11.27□□□□□ -0.61
LETMD1-234ENST00000552645 ATP9AO75110 1047 aa11.27□□□□□ -0.61
LETMD1-234ENST00000552645 CYP3A4P08684 503 aa11.27□□□□□ -0.61
LETMD1-234ENST00000552645 ICAM3P32942 547 aa11.27□□□□□ -0.61
LETMD1-234ENST00000552645 MNX1P50219 401 aaPredicted RBP11.27□□□□□ -0.61
LETMD1-234ENST00000552645 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
LETMD1-234ENST00000552645 NEDD9Q14511 834 aa11.27□□□□□ -0.61
LETMD1-234ENST00000552645 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
LETMD1-234ENST00000552645 CELF3Q5SZQ8 465 aaKnown RBP11.27□□□□□ -0.61
LETMD1-234ENST00000552645 LARP1BQ659C4 914 aaKnown RBP11.27□□□□□ -0.61
LETMD1-234ENST00000552645 CXCL17Q6UXB2 119 aa11.27□□□□□ -0.61
LETMD1-234ENST00000552645 KLHDC9Q8NEP7 349 aa11.27□□□□□ -0.61
LETMD1-234ENST00000552645 A0A1W2PQ45 241 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-234ENST00000552645 A0A1W2PQY0 241 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 MEIS1O00470 390 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 CCNT1O60563 726 aaKnown RBP11.26□□□□□ -0.61
LETMD1-234ENST00000552645 BAG4O95429 457 aaKnown RBP11.26□□□□□ -0.61
LETMD1-234ENST00000552645 TDP2O95551 362 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 CAPN2P17655 700 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 USP11P51784 963 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 HSDL1Q3SXM5 330 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 CRYGNQ8WXF5 182 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-234ENST00000552645 GLT1D1Q96MS3 346 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 SDF4Q9BRK5 362 aa11.26□□□□□ -0.61
LETMD1-234ENST00000552645 IGLV3-22A0A075B6J6 115 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 VPS37CA5D8V6 355 aaPredicted RBP11.25□□□□□ -0.61
LETMD1-234ENST00000552645 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 TNRC18O15417 2968 aaPredicted RBP11.25□□□□□ -0.61
LETMD1-234ENST00000552645 MMP3P08254 477 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 ZNF286BP0CG31 522 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 KCNA2P16389 499 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 CST5P28325 142 aaPredicted RBP11.25□□□□□ -0.61
LETMD1-234ENST00000552645 ZSCAN23Q3MJ62 389 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 GIMAP8Q8ND71 665 aaPredicted RBP11.25□□□□□ -0.61
LETMD1-234ENST00000552645 PPTC7Q8NI37 304 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 PPP1R13LQ8WUF5 828 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 DPF3Q92784 378 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 TNFRSF25Q93038 417 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 ZNF577Q9BSK1 485 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms