RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 XAGE2Q96GT9 111 aa10.1□□□□□ -0.79
PRIM1-208ENST00000552590 TEX13BQ9BXU2 312 aa10.1□□□□□ -0.79
PRIM1-208ENST00000552590 VCPKMTQ9H867 229 aa10.1□□□□□ -0.79
PRIM1-208ENST00000552590 PPP1R9AQ9ULJ8 1098 aa10.1□□□□□ -0.79
PRIM1-208ENST00000552590 WDFY3Q8IZQ1 3526 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 LOC400499M0QZD8 3231 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 SELPP16109 830 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 CTNNB1P35222 781 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 PLCD1P51178 756 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 ZNF385CQ66K41 422 aaPredicted RBP10.09□□□□□ -0.79
PRIM1-208ENST00000552590 CCDC105Q8IYK2 499 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 FLCNQ8NFG4 579 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 NLRP7Q8WX94 980 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 YME1L1Q96TA2 773 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 MTG1Q9BT17 334 aaPredicted RBP10.09□□□□□ -0.79
PRIM1-208ENST00000552590 PCGF6Q9BYE7 350 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 POLR3EQ9NVU0 708 aa10.09□□□□□ -0.79
PRIM1-208ENST00000552590 BARX2Q9UMQ3 279 aaPredicted RBP10.09□□□□□ -0.79
PRIM1-208ENST00000552590 SDHBP21912 280 aa10.08□□□□□ -0.8
PRIM1-208ENST00000552590 MVPQ14764 893 aaKnown RBP10.08□□□□□ -0.8
PRIM1-208ENST00000552590 NFRKBQ6P4R8 1299 aa10.08□□□□□ -0.8
PRIM1-208ENST00000552590 EEPD1Q7L9B9 569 aa10.08□□□□□ -0.8
PRIM1-208ENST00000552590 UBALD2Q8IYN6 164 aa10.08□□□□□ -0.8
PRIM1-208ENST00000552590 FAM133AQ8N9E0 248 aa10.08□□□□□ -0.8
PRIM1-208ENST00000552590 CAGE1Q8TC20 777 aa10.08□□□□□ -0.8
PRIM1-208ENST00000552590 TMX2Q9Y320 296 aa10.08□□□□□ -0.8
PRIM1-208ENST00000552590 Q9Y3F1 56 aa10.08□□□□□ -0.8
PRIM1-208ENST00000552590 ITPR1Q14643 2758 aa10.08□□□□□ -0.8
PRIM1-208ENST00000552590 KRTAP9-6A0A140TA67 174 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 UPP2O95045 317 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 AMHP03971 560 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 TIMP2P16035 220 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 IL15P40933 162 aaPredicted RBP10.07□□□□□ -0.8
PRIM1-208ENST00000552590 USP5P45974 858 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 CHMP4BP1P59074 171 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 MTMR3Q13615 1198 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 PTGISQ16647 500 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 CWF19L1Q69YN2 538 aaKnown RBP10.07□□□□□ -0.8
PRIM1-208ENST00000552590 IQSEC1Q6DN90 963 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 TAPT1Q6NXT6 567 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 TTC6Q86TZ1 520 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 FBXO16Q8IX29 292 aaPredicted RBP10.07□□□□□ -0.8
PRIM1-208ENST00000552590 CPXCR1Q8N123 301 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 SVOPQ8N4V2 548 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 CCDC155Q8N6L0 562 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 DTWD2Q8NBA8 298 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 DHX38Q92620 1227 aaKnown RBP10.07□□□□□ -0.8
PRIM1-208ENST00000552590 CTAGE1Q96RT6 745 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 LMAN2LQ9H0V9 348 aa10.07□□□□□ -0.8
PRIM1-208ENST00000552590 CDV3Q9UKY7 258 aaKnown RBP10.07□□□□□ -0.8
PRIM1-208ENST00000552590 PA2G4Q9UQ80 394 aaKnown RBP10.07□□□□□ -0.8
PRIM1-208ENST00000552590 MYO18BQ8IUG5 2567 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 LGR5O75473 907 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 GLP2RO95838 553 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 ATF7P17544 494 aaPredicted RBP10.06□□□□□ -0.8
PRIM1-208ENST00000552590 NNTQ13423 1086 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 FAM83BQ5T0W9 1011 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 ADGRD2Q7Z7M1 963 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 GPR161Q8N6U8 529 aaKnown RBP10.06□□□□□ -0.8
PRIM1-208ENST00000552590 EFHBQ8N7U6 833 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 SUSD6Q92537 303 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 ARHGEF10LQ9HCE6 1279 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 SORCS3Q9UPU3 1222 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 CACNA1IQ9P0X4 2223 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 LAMA5O15230 3695 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 FANCMQ8IYD8 2048 aa10.06□□□□□ -0.8
PRIM1-208ENST00000552590 MYO5AQ9Y4I1 1855 aaKnown RBP10.06□□□□□ -0.8
PRIM1-208ENST00000552590 RAD21O60216 631 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 CKBP12277 381 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 SH3BP2P78314 561 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 ICA1Q05084 483 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 CAMK1Q14012 370 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 MBTPS1Q14703 1052 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 KIAA1211Q6ZU35 1233 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 TMEM179Q6ZVK1 233 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 RBM23Q86U06 439 aaKnown RBP10.05□□□□□ -0.8
PRIM1-208ENST00000552590 NEUROD6Q96NK8 337 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 C11orf84Q9BUA3 381 aaPredicted RBP10.05□□□□□ -0.8
PRIM1-208ENST00000552590 USP44Q9H0E7 712 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 SNRKQ9NRH2 765 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 DMXL2Q8TDJ6 3036 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 IGSF10Q6WRI0 2623 aa10.05□□□□□ -0.8
PRIM1-208ENST00000552590 C5orf67F2Z3F1 127 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 PARNO95453 639 aaKnown RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 AOC1P19801 751 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 BMPR1AP36894 532 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 NRIP1P48552 1158 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 CPT1AP50416 773 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 WDR4P57081 412 aaKnown RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 RBM10P98175 930 aaKnown RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 PTPN11Q06124 597 aaPredicted RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 GABPAQ06546 454 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 PPM1JQ5JR12 505 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 GDF6Q6KF10 455 aaPredicted RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 MIGA1Q8NAN2 632 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 RIN2Q8WYP3 895 aaPredicted RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 RTKNQ9BST9 563 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 SH2D4AQ9H788 454 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 USP9XQ93008 2570 aaPredicted RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 ASB14A6NK59 587 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms