RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	ASNS	P08243	561 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	CYP2D6	P10635	497 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	NPR3	P17342	541 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	GTF2A2	P52657	109 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	SNAPC2	Q13487	334 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	MCMDC2	Q4G0Z9	681 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	SBK1	Q52WX2	424 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	PRSS36	Q5K4E3	855 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	FAM117B	Q6P1L5	589 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	CTR9	Q6PD62	1173 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	CCDC129	Q6ZRS4	1044 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	ZNF589	Q86UQ0	364 aa	Predicted RBP	7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	SKAP1	Q86WV1	359 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	AMOTL1	Q8IY63	956 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	MEGF10	Q96KG7	1140 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	DIAPH3	Q9NSV4	1193 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	GINM1	Q9NU53	330 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	SAGE1	Q9NXZ1	904 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	PPP4R2	Q9NY27	417 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	SWAP70	Q9UH65	585 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	SALL4	Q9UJQ4	1053 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	ZMYM6	O95789	1325 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	CCDC171	Q6TFL3	1326 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422		A0A0G2JMZ2	1700 aa		7.92	□□□□□ -1.14
CNOT2-238	ENST00000552422	PATL2	C9JE40	543 aa	Known RBP	7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	SMIM22	K7EJ46	135 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	CETP	P11597	493 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	TDO2	P48775	406 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	INHBE	P58166	350 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	JAG1	P78504	1218 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	SHROOM1	Q2M3G4	852 aa	Predicted RBP	7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	BMP2KL	Q5H9B9	411 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	VPS53	Q5VIR6	699 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	CWC27	Q6UX04	472 aa	Known RBP	7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	ADAMTSL4	Q6UY14	1074 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	C16orf86	Q6ZW13	317 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	IFNL3	Q8IZI9	196 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422		Q8N3U1	123 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	SLC44A5	Q8NCS7	719 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	BRI3BP	Q8WY22	251 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	DYNLL2	Q96FJ2	89 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	POP1	Q99575	1024 aa	Known RBP	7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	PTPN18	Q99952	460 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	NACAP1	Q9BZK3	213 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	RNF186	Q9NXI6	227 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	ZBTB21	Q9ULJ3	1066 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	AFG3L2	Q9Y4W6	797 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	ZHX2	Q9Y6X8	837 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	RAD50	Q92878	1312 aa		7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	ZNFX1	Q9P2E3	1918 aa	Known RBP	7.91	□□□□□ -1.14
CNOT2-238	ENST00000552422	MKI67	P46013	3256 aa	Known RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	CCL15-CCL14	A0A0B4J2E2	113 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422		A0A0G2JLL6	359 aa	Predicted RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422		F8W735	103 aa	Predicted RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	CXCL11	O14625	94 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	FOXN1	O15353	648 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	PHACTR2	O75167	634 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	GH2	P01242	217 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	APP	P05067	770 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	HSPD1	P10809	573 aa	Known RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	ACPP	P15309	386 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	CD68	P34810	354 aa	Predicted RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	CDK8	P49336	464 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	MFAP1	P55081	439 aa	Known RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	EHHADH	Q08426	723 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	MOGS	Q13724	837 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	ALX1	Q15699	326 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	CCL15	Q16663	113 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	CERKL	Q49MI3	558 aa	Predicted RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	CCDC84	Q86UT8	332 aa	Predicted RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	TMEM130	Q8N3G9	435 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	GALNT11	Q8NCW6	608 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	NAPB	Q9H115	298 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	IL25	Q9H293	177 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	CHRD	Q9H2X0	955 aa		7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	ZCCHC17	Q9NP64	241 aa	Known RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.9	□□□□□ -1.14
CNOT2-238	ENST00000552422	PLIN4	Q96Q06	1357 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	TRIM75P	A6NK02	468 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	MINDY4B	A8MYZ0	360 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	FSCN2	O14926	492 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	FZD6	O60353	706 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	TRPA1	O75762	1119 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	HSPA8	P11142	646 aa	Known RBP	7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	EPHA1	P21709	976 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	CHML	P26374	656 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	CTCF	P49711	727 aa	Predicted RBP	7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	PPARA	Q07869	468 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	ABCB5	Q2M3G0	1257 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	XP32	Q5T750	250 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	FAM43A	Q8N2R8	423 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	AGGF1	Q8N302	714 aa	eCLIP	7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	SNX29	Q8TEQ0	813 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	WDR18	Q9BV38	432 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	DZANK1	Q9NVP4	752 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	SMCHD1	A6NHR9	2005 aa		7.89	□□□□□ -1.15
CNOT2-238	ENST00000552422	PLXNB2	O15031	1838 aa		7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms