RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 DDR1Q08345 913 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 ITGB3BPQ13352 177 aaPredicted RBP16.53■□□□□ 0.24
PDE1B-207ENST00000550620 IFI16Q16666 785 aaKnown RBP16.53■□□□□ 0.24
PDE1B-207ENST00000550620 CEP85LQ5SZL2 805 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 C10orf76Q5T2E6 689 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 C3orf20Q8ND61 904 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 SNX29Q8TEQ0 813 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 TBC1D5Q92609 795 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 LRRC45Q96CN5 670 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 CCT8L2Q96SF2 557 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDE1B-207ENST00000550620 TMBIM4Q9HC24 238 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 PLAAQ9Y263 795 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 BTNL10A8MVZ5 291 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 TRAF5O00463 557 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 RAD51CO43502 376 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 TLR2O60603 784 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 MYBP10242 640 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 KIAA0753Q2KHM9 967 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 BIN2Q9UBW5 565 aaPredicted RBP16.53■□□□□ 0.24
PDE1B-207ENST00000550620 A0A0G2JS52 829 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 NOL4O94818 638 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 RPS8P62241 208 aaKnown RBP16.52■□□□□ 0.24
PDE1B-207ENST00000550620 GSTO1P78417 241 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 KLHL30Q0D2K2 578 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 RAPGEF1Q13905 1077 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 HLTFQ14527 1009 aaKnown RBP eCLIP16.52■□□□□ 0.24
PDE1B-207ENST00000550620 RPS6KA1Q15418 735 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 ASIC2Q16515 512 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 ZCWPW2Q504Y3 356 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 PBKQ96KB5 322 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 TMEM59LQ9UK28 342 aa16.52■□□□□ 0.24
PDE1B-207ENST00000550620 GSCP56915 257 aaPredicted RBP16.51■□□□□ 0.23
PDE1B-207ENST00000550620 ITPK1Q13572 414 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 LRRC41Q15345 812 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 TMEM119Q4V9L6 283 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 RNF187Q5TA31 235 aaPredicted RBP16.51■□□□□ 0.23
PDE1B-207ENST00000550620 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 SH3RF3Q8TEJ3 882 aaPredicted RBP16.51■□□□□ 0.23
PDE1B-207ENST00000550620 VCPKMTQ9H867 229 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 A1CFQ9NQ94 594 aaKnown RBP16.51■□□□□ 0.23
PDE1B-207ENST00000550620 BMP2KQ9NSY1 1161 aaPredicted RBP16.51■□□□□ 0.23
PDE1B-207ENST00000550620 AIPL1Q9NZN9 384 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.51■□□□□ 0.23
PDE1B-207ENST00000550620 E7EVH7 732 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 MYO1FO00160 1098 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 LDHBP07195 334 aaKnown RBP16.51■□□□□ 0.23
PDE1B-207ENST00000550620 ERCC3P19447 782 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 RASA1P20936 1047 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 EPS15P42566 896 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 MARSP56192 900 aaKnown RBP16.51■□□□□ 0.23
PDE1B-207ENST00000550620 BIRC3Q13489 604 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 KLHL7Q8IXQ5 586 aa16.51■□□□□ 0.23
PDE1B-207ENST00000550620 HDLBPQ00341 1268 aaKnown RBP16.5■□□□□ 0.23
PDE1B-207ENST00000550620 ACTN3Q08043 901 aaPredicted RBP16.5■□□□□ 0.23
PDE1B-207ENST00000550620 COASYQ13057 564 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 MTMR3Q13615 1198 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 FAM26FQ5R3K3 315 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
PDE1B-207ENST00000550620 ACTR5Q9H9F9 607 aaPredicted RBP16.5■□□□□ 0.23
PDE1B-207ENST00000550620 DOT1LQ8TEK3 1739 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 A0A087X0T9 212 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 KCNK3O14649 394 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 ZPR1O75312 459 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 FAM228BP0C875 321 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 RPAINQ86UA6 219 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 TRIM59Q8IWR1 403 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 SLC44A5Q8NCS7 719 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 WDR66Q8TBY9 1149 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 ACTRT1Q8TDG2 376 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 PIGSQ96S52 555 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 TACO1Q9BSH4 297 aaKnown RBP16.5■□□□□ 0.23
PDE1B-207ENST00000550620 CPVLQ9H3G5 476 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 PANK4Q9NVE7 773 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 ADAMTS1Q9UHI8 967 aa16.5■□□□□ 0.23
PDE1B-207ENST00000550620 PACSIN2Q9UNF0 486 aaPredicted RBP16.5■□□□□ 0.23
PDE1B-207ENST00000550620 POTEMA6NI47 508 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 HPDP32754 393 aaPredicted RBP16.49■□□□□ 0.23
PDE1B-207ENST00000550620 MAP2K2P36507 400 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 HSD17B3P37058 310 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 SMTNP53814 917 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 SEC24CP53992 1094 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 EYA3Q99504 573 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 VAT1LQ9HCJ6 419 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 TMEM260Q9NX78 707 aa16.49■□□□□ 0.23
PDE1B-207ENST00000550620 GOLGA6L7A0A1B0GV03 622 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 SLC37A4O43826 429 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 KIF4AO95239 1232 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 CTNNA1P35221 906 aaKnown RBP16.48■□□□□ 0.23
PDE1B-207ENST00000550620 USP11P51784 963 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 ADCY7P51828 1080 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 RNASE9P60153 205 aaKnown RBP16.48■□□□□ 0.23
PDE1B-207ENST00000550620 PPP4CP60510 307 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 ERVK-9P63128 1117 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 CCDC121Q6ZUS5 278 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 ARMC9Q7Z3E5 817 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 CCDC65Q8IXS2 484 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms