RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 PRMT6Q96LA8 375 aaPredicted RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 ALS2CR12Q96Q35 445 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 WDR11Q9BZH6 1224 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 ACBD3Q9H3P7 528 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 MMRN2Q9H8L6 949 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 NHEJ1Q9H9Q4 299 aaPredicted RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 METTL14Q9HCE5 456 aaKnown RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 TUFT1Q9NNX1 390 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 EMILIN3Q9NT22 766 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 KCND2Q9NZV8 630 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 ZNF219Q9P2Y4 722 aaPredicted RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 ZNF70Q9UC06 446 aaPredicted RBP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 FEM1BQ9UK73 627 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 PRR12Q9ULL5 1215 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 MYO6Q9UM54 1294 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 PLAGL2Q9UPG8 496 aa9.9□□□□□ -0.82
TMEM116-209ENST00000550020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.9□□□□□ -0.82
TMEM116-209ENST00000550020 SSU72P8A0A1W2PR75 194 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 FRMD3A2A2Y4 597 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 CCDC151A5D8V7 595 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 C21orf2O43822 256 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 EDIL3O43854 480 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 CYP11B2P19099 503 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 ANXA13P27216 316 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 VAV2P52735 878 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 CBX1P83916 185 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 SF3B2Q13435 895 aaKnown RBP9.89□□□□□ -0.83
TMEM116-209ENST00000550020 NAA30Q147X3 362 aaPredicted RBP9.89□□□□□ -0.83
TMEM116-209ENST00000550020 USH1GQ495M9 461 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 SLC9C1Q4G0N8 1177 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 ZCWPW2Q504Y3 356 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 NCAPH2Q6IBW4 605 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 LRRC55Q6ZSA7 311 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 MCF2L2Q86YR7 1114 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 NIM1KQ8IY84 436 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 CCDC155Q8N6L0 562 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 TRIM58Q8NG06 486 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 HNRNPLLQ8WVV9 542 aaKnown RBP9.89□□□□□ -0.83
TMEM116-209ENST00000550020 CHP1Q99653 195 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 MAP3K20Q9NYL2 800 aaKnown RBP9.89□□□□□ -0.83
TMEM116-209ENST00000550020 CEP72Q9P209 647 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 SEL1LQ9UBV2 794 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 TSKSQ9UJT2 592 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 ZBTB21Q9ULJ3 1066 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 GUCA1BQ9UMX6 200 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 SIK3Q9Y2K2 1263 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 DAAM1Q9Y4D1 1078 aa9.89□□□□□ -0.83
TMEM116-209ENST00000550020 UBE4BO95155 1302 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 FAM196BA6NMK8 535 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 POTECB2RU33 542 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 TCP10L2B9ZVM9 353 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 E9PMD0 336 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 PDXKO00764 312 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 SLC16A3O15427 465 aaKnown RBP9.88□□□□□ -0.83
TMEM116-209ENST00000550020 AKR1B10O60218 316 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 EIF3JO75822 258 aaKnown RBP9.88□□□□□ -0.83
TMEM116-209ENST00000550020 LCA5LO95447 670 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 EYA4O95677 639 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 ASNSP08243 561 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 CLCN6P51797 869 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 SLC12A3P55017 1021 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 TNFAIP1Q13829 316 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 MAP9Q49MG5 647 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 WDR59Q6PJI9 974 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 KCNK18Q7Z418 384 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 FRMD5Q7Z6J6 570 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 CATSPER3Q86XQ3 398 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 ZC3H3Q8IXZ2 948 aaKnown RBP9.88□□□□□ -0.83
TMEM116-209ENST00000550020 RUBCNQ92622 972 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 SECISBP2LQ93073 1101 aaKnown RBP9.88□□□□□ -0.83
TMEM116-209ENST00000550020 ARID3AQ99856 593 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 NUDT12Q9BQG2 462 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 IFIH1Q9BYX4 1025 aaKnown RBP9.88□□□□□ -0.83
TMEM116-209ENST00000550020 RANBP17Q9H2T7 1088 aaKnown RBP9.88□□□□□ -0.83
TMEM116-209ENST00000550020 VCPKMTQ9H867 229 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 AGPAT5Q9NUQ2 364 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 ZNRF3Q9ULT6 936 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 TRAF3IP3Q9Y228 551 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 SAR1BQ9Y6B6 198 aa9.88□□□□□ -0.83
TMEM116-209ENST00000550020 BZW2Q9Y6E2 419 aaKnown RBP9.88□□□□□ -0.83
TMEM116-209ENST00000550020 BAZ2BQ9UIF8 2168 aaKnown RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 SPDYE4A6NLX3 237 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 RNF225M0QZC1 329 aaPredicted RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 EIF3DO15371 548 aaKnown RBP eCLIP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 MED24O75448 989 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 SERPING1P05155 500 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 FDX1P10109 184 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 PRLRP16471 622 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 SPIRE1Q08AE8 756 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 PPP2R5CQ13362 524 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 MAPK8IP2Q13387 824 aaPredicted RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 ADAM9Q13443 819 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 KNOP1Q1ED39 458 aaKnown RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 BMT2Q1RMZ1 405 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 C10orf76Q5T2E6 689 aa9.87□□□□□ -0.83
TMEM116-209ENST00000550020 UTP14CQ5TAP6 766 aaKnown RBP9.87□□□□□ -0.83
TMEM116-209ENST00000550020 SFMBT2Q5VUG0 894 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms