RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 PCDHA6Q9UN73 950 aa27.69■■■□□ 2.02
USP44-205ENST00000549639 PCDHA8Q9Y5H6 950 aa27.69■■■□□ 2.02
USP44-205ENST00000549639 V9GY48 417 aaPredicted RBP27.69■■■□□ 2.02
USP44-205ENST00000549639 BAIAP3O94812 1187 aa27.68■■■□□ 2.02
USP44-205ENST00000549639 FOSP01100 380 aaPredicted RBP27.68■■■□□ 2.02
USP44-205ENST00000549639 PBX2P40425 430 aa27.68■■■□□ 2.02
USP44-205ENST00000549639 UBE2SQ16763 222 aa27.68■■■□□ 2.02
USP44-205ENST00000549639 LRRC8DQ7L1W4 858 aa27.68■■■□□ 2.02
USP44-205ENST00000549639 MYLIPQ8WY64 445 aa27.68■■■□□ 2.02
USP44-205ENST00000549639 DHX38Q92620 1227 aaKnown RBP27.68■■■□□ 2.02
USP44-205ENST00000549639 RIC8AQ9NPQ8 531 aa27.68■■■□□ 2.02
USP44-205ENST00000549639 ZNF215Q9UL58 517 aaPredicted RBP27.68■■■□□ 2.02
USP44-205ENST00000549639 CDH23Q9H251 3354 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 CKBP12277 381 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 FOSL2P15408 326 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 ATP2A2P16615 1042 aaKnown RBP27.67■■■□□ 2.02
USP44-205ENST00000549639 METAP2P50579 478 aaKnown RBP eCLIP27.67■■■□□ 2.02
USP44-205ENST00000549639 Q6ZUG5 572 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 PHOSPHO2Q8TCD6 241 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 SLC9A7Q96T83 725 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 BCAS3Q9H6U6 928 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 FAM217BQ9NTX9 383 aaPredicted RBP27.67■■■□□ 2.02
USP44-205ENST00000549639 BARHL2Q9NY43 387 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 PCDHA11Q9Y5I1 949 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 UBIAD1Q9Y5Z9 338 aa27.67■■■□□ 2.02
USP44-205ENST00000549639 C17orf102A2RUQ5 167 aa27.66■■■□□ 2.02
USP44-205ENST00000549639 GRIN2CQ14957 1233 aa27.66■■■□□ 2.02
USP44-205ENST00000549639 SLC28A3Q9HAS3 691 aa27.66■■■□□ 2.02
USP44-205ENST00000549639 NAP1L2Q9ULW6 460 aaPredicted RBP27.66■■■□□ 2.02
USP44-205ENST00000549639 SCN5AQ14524 2016 aa27.66■■■□□ 2.02
USP44-205ENST00000549639 TRIP12Q14669 1992 aaPredicted RBP27.66■■■□□ 2.02
USP44-205ENST00000549639 GNAT1P11488 350 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 ITGB5P18084 799 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 RPS6KB1P23443 525 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 CDC27P30260 824 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 HOXC8P31273 242 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 ADCY7P51828 1080 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 MTMR1Q13613 665 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 ERICH6BQ5W0A0 696 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 SERINC5Q86VE9 423 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 MAFAQ8NHW3 353 aaPredicted RBP27.65■■■□□ 2.02
USP44-205ENST00000549639 BRF1Q92994 677 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 AGXT2Q9BYV1 514 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 JADE2Q9NQC1 790 aa27.65■■■□□ 2.02
USP44-205ENST00000549639 NID2Q14112 1375 aa27.64■■■□□ 2.02
USP44-205ENST00000549639 STXBP3O00186 592 aa27.64■■■□□ 2.02
USP44-205ENST00000549639 CXCL10P02778 98 aa27.64■■■□□ 2.02
USP44-205ENST00000549639 AP3B2Q13367 1082 aa27.64■■■□□ 2.02
USP44-205ENST00000549639 TRIM71Q2Q1W2 868 aaKnown RBP27.64■■■□□ 2.02
USP44-205ENST00000549639 SMCO2A6NFE2 343 aa27.63■■■□□ 2.01
USP44-205ENST00000549639 SMIM10L2AP0DMW4 78 aa27.63■■■□□ 2.01
USP44-205ENST00000549639 SMIM10L2BP0DMW5 78 aa27.63■■■□□ 2.01
USP44-205ENST00000549639 CPA1P15085 419 aa27.63■■■□□ 2.01
USP44-205ENST00000549639 KCNA2P16389 499 aa27.63■■■□□ 2.01
USP44-205ENST00000549639 APOBRQ0VD83 1088 aa27.63■■■□□ 2.01
USP44-205ENST00000549639 ATP6V0A1Q93050 837 aa27.63■■■□□ 2.01
USP44-205ENST00000549639 ADD1P35611 737 aaKnown RBP27.62■■■□□ 2.01
USP44-205ENST00000549639 PFKFB3Q16875 520 aaPredicted RBP27.62■■■□□ 2.01
USP44-205ENST00000549639 MCTP2Q6DN12 878 aa27.62■■■□□ 2.01
USP44-205ENST00000549639 TYW1BQ6NUM6 668 aa27.62■■■□□ 2.01
USP44-205ENST00000549639 CNKSR3Q6P9H4 555 aa27.62■■■□□ 2.01
USP44-205ENST00000549639 CCDC12Q8WUD4 166 aaPredicted RBP27.62■■■□□ 2.01
USP44-205ENST00000549639 GAS2L1Q99501 681 aaPredicted RBP27.62■■■□□ 2.01
USP44-205ENST00000549639 NKX2-4Q9H2Z4 354 aa27.62■■■□□ 2.01
USP44-205ENST00000549639 RNPEPQ9H4A4 650 aa27.62■■■□□ 2.01
USP44-205ENST00000549639 YBX2Q9Y2T7 364 aaKnown RBP27.62■■■□□ 2.01
USP44-205ENST00000549639 EMSYQ7Z589 1322 aa27.62■■■□□ 2.01
USP44-205ENST00000549639 EFCAB14O75071 495 aa27.61■■■□□ 2.01
USP44-205ENST00000549639 ATP9AO75110 1047 aa27.61■■■□□ 2.01
USP44-205ENST00000549639 CAND2O75155 1236 aa27.61■■■□□ 2.01
USP44-205ENST00000549639 ZNF200P98182 395 aaPredicted RBP27.61■■■□□ 2.01
USP44-205ENST00000549639 SEPT1Q8WYJ6 367 aa27.61■■■□□ 2.01
USP44-205ENST00000549639 MXRA8Q9BRK3 442 aa27.61■■■□□ 2.01
USP44-205ENST00000549639 SCG2P13521 617 aa27.6■■■□□ 2.01
USP44-205ENST00000549639 TCF7P36402 384 aaPredicted RBP27.6■■■□□ 2.01
USP44-205ENST00000549639 KCNJ6P48051 423 aa27.6■■■□□ 2.01
USP44-205ENST00000549639 EVCP57679 992 aa27.6■■■□□ 2.01
USP44-205ENST00000549639 HIC1Q14526 733 aa27.6■■■□□ 2.01
USP44-205ENST00000549639 GPNMBQ14956 572 aa27.6■■■□□ 2.01
USP44-205ENST00000549639 ZNF618Q5T7W0 954 aa27.6■■■□□ 2.01
USP44-205ENST00000549639 UTP14CQ5TAP6 766 aaKnown RBP27.6■■■□□ 2.01
USP44-205ENST00000549639 ANO3Q9BYT9 981 aa27.6■■■□□ 2.01
USP44-205ENST00000549639 PPP4R2Q9NY27 417 aa27.6■■■□□ 2.01
USP44-205ENST00000549639 ESYT2A0FGR8 921 aa27.59■■■□□ 2.01
USP44-205ENST00000549639 KIF28PB7ZC32 967 aa27.59■■■□□ 2.01
USP44-205ENST00000549639 PRPF3O43395 683 aaKnown RBP27.59■■■□□ 2.01
USP44-205ENST00000549639 NBNO60934 754 aa27.59■■■□□ 2.01
USP44-205ENST00000549639 CLK2P49760 499 aaKnown RBP27.59■■■□□ 2.01
USP44-205ENST00000549639 RABGGTBP53611 331 aa27.59■■■□□ 2.01
USP44-205ENST00000549639 SP4Q02446 784 aa27.59■■■□□ 2.01
USP44-205ENST00000549639 TRAF7Q6Q0C0 670 aa27.59■■■□□ 2.01
USP44-205ENST00000549639 NRCAMQ92823 1304 aa27.59■■■□□ 2.01
USP44-205ENST00000549639 TET1Q8NFU7 2136 aa27.59■■■□□ 2.01
USP44-205ENST00000549639 DOCK5Q9H7D0 1870 aa27.59■■■□□ 2.01
USP44-205ENST00000549639 GBF1Q92538 1859 aa27.58■■■□□ 2.01
USP44-205ENST00000549639 ABHD14A-ACY1A0A1B0GW23 586 aa27.58■■■□□ 2.01
USP44-205ENST00000549639 SREBF1P36956 1147 aa27.58■■■□□ 2.01
USP44-205ENST00000549639 THPOP40225 353 aa27.58■■■□□ 2.01
USP44-205ENST00000549639 AKAP17AQ02040 695 aaKnown RBP27.58■■■□□ 2.01
USP44-205ENST00000549639 CEP55Q53EZ4 464 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms