RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MCF2L2Q86YR7 1114 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 APOBEC3FQ8IUX4 373 aaKnown RBP11.12□□□□□ -0.63
RAB5B-206ENST00000549505 CCDC65Q8IXS2 484 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 CSGALNACT2Q8N6G5 542 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 REPS2Q8NFH8 660 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 PRDM4Q9UKN5 801 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 SIK3Q9Y2K2 1263 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 UBIAD1Q9Y5Z9 338 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 TRIM49BA6NDI0 452 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 N4BP3O15049 544 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 LCA5LO95447 670 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 GIT2Q14161 759 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 LDHDQ86WU2 507 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 TUBGCP2Q9BSJ2 902 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 STRA6Q9BX79 667 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 WDR11Q9BZH6 1224 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 PCNX4Q63HM2 1172 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 CDAN1Q8IWY9 1227 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 SYN2Q92777 582 aaPredicted RBP11.11□□□□□ -0.63
RAB5B-206ENST00000549505 C16orf45Q96MC5 204 aaPredicted RBP11.11□□□□□ -0.63
RAB5B-206ENST00000549505 SLF1Q9BQI6 1058 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 EIF3DO15371 548 aaKnown RBP eCLIP11.11□□□□□ -0.63
RAB5B-206ENST00000549505 MAPTP10636 758 aaKnown RBP11.11□□□□□ -0.63
RAB5B-206ENST00000549505 MAN2A1Q16706 1144 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 DCAF15Q66K64 600 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 CYP26C1Q6V0L0 522 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 RASSF8Q8NHQ8 419 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 CNOT6LQ96LI5 555 aaKnown RBP11.11□□□□□ -0.63
RAB5B-206ENST00000549505 SENP7Q9BQF6 1050 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 ZNF341Q9BYN7 854 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
RAB5B-206ENST00000549505 PANK4Q9NVE7 773 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 MAGEC2Q9UBF1 373 aaPredicted RBP11.11□□□□□ -0.63
RAB5B-206ENST00000549505 PPP1R9AQ9ULJ8 1098 aa11.11□□□□□ -0.63
RAB5B-206ENST00000549505 GAP43P17677 238 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 PPP2R3AQ06190 1150 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 EPHA7Q15375 998 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 VWA3BQ502W6 1294 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 CEP55Q53EZ4 464 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 RAD9BQ6WBX8 426 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 SCYL3Q8IZE3 742 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 MYOCDQ8IZQ8 938 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 MXRA8Q9BRK3 442 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 SEL1LQ9UBV2 794 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 DAAM1Q9Y4D1 1078 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 TPM1P09493 284 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 CASP14P31944 242 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 INPP5BP32019 993 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 GMPSP49915 693 aaPredicted RBP11.1□□□□□ -0.63
RAB5B-206ENST00000549505 ZBED6P86452 979 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 MYBPC2Q14324 1141 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 TKFCQ3LXA3 575 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 FAM26FQ5R3K3 315 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 CCDC170Q8IYT3 715 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 TAB2Q9NYJ8 693 aa11.1□□□□□ -0.63
RAB5B-206ENST00000549505 C19orf81C9J6K1 198 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 ADKP55263 362 aaKnown RBP11.09□□□□□ -0.63
RAB5B-206ENST00000549505 FKBP3Q00688 224 aaKnown RBP11.09□□□□□ -0.63
RAB5B-206ENST00000549505 PRR16Q569H4 304 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 DNTTIP2Q5QJE6 756 aaKnown RBP11.09□□□□□ -0.63
RAB5B-206ENST00000549505 OR8K1Q8NGG5 319 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 ERO1AQ96HE7 468 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 EIF2AK1Q9BQI3 630 aaKnown RBP11.09□□□□□ -0.63
RAB5B-206ENST00000549505 EMILIN3Q9NT22 766 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 KIAA1024Q9UPX6 916 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
RAB5B-206ENST00000549505 FANCGO15287 622 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 SLC16A3O15427 465 aaKnown RBP11.09□□□□□ -0.63
RAB5B-206ENST00000549505 CCDC175P0C221 793 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 GUCY2CP25092 1073 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 ERVK-24P63145 666 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 TOGARAM2Q6ZUX3 1019 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 C1orf186Q6ZWK4 172 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 CCDC84Q86UT8 332 aaPredicted RBP11.09□□□□□ -0.63
RAB5B-206ENST00000549505 RDM1Q8NG50 284 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 SCFD1Q8WVM8 642 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 PLIN2Q99541 437 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 TIPINQ9BVW5 301 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 DBR1Q9UK59 544 aaKnown RBP11.09□□□□□ -0.63
RAB5B-206ENST00000549505 FBXL5Q9UKA1 691 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 ODF2LQ9ULJ1 636 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 DNM3Q9UQ16 869 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 POTECB2RU33 542 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 PDXKO00764 312 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 DHX15O43143 795 aaKnown RBP11.09□□□□□ -0.63
RAB5B-206ENST00000549505 SLITRK3O94933 977 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 UBXN1Q04323 297 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 DPY19L2P1Q6NXN4 242 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 WDR59Q6PJI9 974 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 POTEBQ6S5H4 581 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 TRIM59Q8IWR1 403 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 MICALL2Q8IY33 904 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 GPC2Q8N158 579 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
RAB5B-206ENST00000549505 TSG101Q99816 390 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms