RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ZNF618Q5T7W0 954 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 VPS53Q5VIR6 699 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 FRMD5Q7Z6J6 570 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 UBALD2Q8IYN6 164 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 FIBCD1Q8N539 461 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 EFHBQ8N7U6 833 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 C7orf31Q8N865 590 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 DNERQ8NFT8 737 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 PPP1R13LQ8WUF5 828 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 SEPT8Q92599 483 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 RMDN1Q96DB5 314 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
TROAP-208ENST00000548817 KATNAL1Q9BW62 490 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 PLVAPQ9BX97 442 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 SEMA4AQ9H3S1 761 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 ZFHX4Q86UP3 3567 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 GRM6O15303 877 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 LINC01565O15544 149 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 MMP3P08254 477 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 FGRP09769 529 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 TXNP10599 105 aaKnown RBP9.9□□□□□ -0.82
TROAP-208ENST00000548817 EDNRBP24530 442 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 NOVP48745 357 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 PDE1AP54750 535 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 HAND2P61296 217 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 RPS6P62753 249 aaKnown RBP9.9□□□□□ -0.82
TROAP-208ENST00000548817 GPATCH4Q5T3I0 446 aaKnown RBP9.9□□□□□ -0.82
TROAP-208ENST00000548817 RASGRP2Q7LDG7 609 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 ESR2Q92731 530 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 KAT2BQ92831 832 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 CLP1Q92989 425 aaKnown RBP9.9□□□□□ -0.82
TROAP-208ENST00000548817 RILPL2Q969X0 211 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 IL17RAQ96F46 866 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 FAM227BQ96M60 508 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 CNTNAP3BQ96NU0 1288 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 IFIH1Q9BYX4 1025 aaKnown RBP9.9□□□□□ -0.82
TROAP-208ENST00000548817 CNTNAP3Q9BZ76 1288 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 CLEC1BQ9P126 229 aa9.9□□□□□ -0.82
TROAP-208ENST00000548817 USP15Q9Y4E8 981 aaPredicted RBP9.9□□□□□ -0.82
TROAP-208ENST00000548817 WDR19Q8NEZ3 1342 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 MAP1BP46821 2468 aaKnown RBP9.89□□□□□ -0.83
TROAP-208ENST00000548817 RSPH10B2B2RC85 870 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 ZNF213O14771 459 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 FOXP2O15409 715 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 DHX16O60231 1041 aaKnown RBP9.89□□□□□ -0.83
TROAP-208ENST00000548817 RSPH10BP0C881 870 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 HSPD1P10809 573 aaKnown RBP9.89□□□□□ -0.83
TROAP-208ENST00000548817 PDHBP11177 359 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 NT5C2P49902 561 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 ZNF543Q08ER8 600 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 NMIQ13287 307 aaPredicted RBP9.89□□□□□ -0.83
TROAP-208ENST00000548817 USH1GQ495M9 461 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 NAALADL2Q58DX5 795 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 SLC30A10Q6XR72 485 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 IQCA1Q86XH1 822 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 TMEM105Q8N8V8 129 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 APBB2Q92870 758 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 P2RX5Q93086 422 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 RPGRIP1Q96KN7 1286 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 MAF1Q9H063 256 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 IGFLR1Q9H665 355 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 KAT14Q9H8E8 782 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 USP24Q9UPU5 2620 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 CFAP47Q6ZTR5 3102 aa9.89□□□□□ -0.83
TROAP-208ENST00000548817 ABCB11O95342 1321 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 ZMYM6O95789 1325 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 CCDC171Q6TFL3 1326 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 ADGRA3Q8IWK6 1321 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 A0A0D9SFI3 127 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 CAND2O75155 1236 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 F2P00734 622 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 PDGFBP01127 241 aaPredicted RBP9.88□□□□□ -0.83
TROAP-208ENST00000548817 GH1P01241 217 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 LINC00271P0C7V0 271 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 GTF2F1P35269 517 aaKnown RBP eCLIP9.88□□□□□ -0.83
TROAP-208ENST00000548817 CLCN5P51795 746 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 DGKDQ16760 1214 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 ASTLQ6HA08 431 aaPredicted RBP9.88□□□□□ -0.83
TROAP-208ENST00000548817 CCDC62Q6P9F0 684 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 DGKHQ86XP1 1220 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 MCF2L2Q86YR7 1114 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 NSUN6Q8TEA1 469 aaKnown RBP9.88□□□□□ -0.83
TROAP-208ENST00000548817 AFG1LQ8WV93 481 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 CLEC4DQ8WXI8 215 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 SUSD6Q92537 303 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 COPS5Q92905 334 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 DLL3Q9NYJ7 618 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 HDAC6Q9UBN7 1215 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 OTOGLQ3ZCN5 2332 aa9.88□□□□□ -0.83
TROAP-208ENST00000548817 ANKRD11Q6UB99 2663 aaPredicted RBP9.88□□□□□ -0.83
TROAP-208ENST00000548817 FAM208BQ5VWN6 2430 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 SALL3Q9BXA9 1300 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 FRYLO94915 3013 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.87□□□□□ -0.83
TROAP-208ENST00000548817 HAS3O00219 553 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 UPP2O95045 317 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 GOLGA8HP0CJ92 632 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 PSEN2P49810 448 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 ARHGAP1Q07960 439 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms