RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 TLE2Q04725 743 aa13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 PTPN11Q06124 597 aaPredicted RBP13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 ARHGAP1Q07960 439 aa13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 ITGA7Q13683 1181 aa13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 GNL2Q13823 731 aaKnown RBP13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 NBR1Q14596 966 aa13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 SAFBQ15424 915 aaKnown RBP eCLIP13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 DGKDQ16760 1214 aa13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 TRIM60Q495X7 471 aa13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 CELF3Q5SZQ8 465 aaKnown RBP13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 JAKMIP3Q5VZ66 844 aa13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 CXCL17Q6UXB2 119 aa13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 PPTC7Q8NI37 304 aa13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 LBHD1Q9BQE6 289 aaPredicted RBP13.33□□□□□ -0.28
TUBA1C-203ENST00000548470 M0R2N6 131 aa13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 WNT7AO00755 349 aa13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 CLTBP09497 229 aa13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 SUPT20HL2P0C7V6 817 aa13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 CLK2P49760 499 aaKnown RBP13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 TMEM63BQ5T3F8 832 aa13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 MYSM1Q5VVJ2 828 aa13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 DAGLBQ8NCG7 672 aa13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 IL31RAQ8NI17 732 aa13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 MLXIPQ9HAP2 919 aa13.32□□□□□ -0.28
TUBA1C-203ENST00000548470 KIAA0355O15063 1070 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 MYL3P08590 195 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 U2AF2P26368 475 aaKnown RBP eCLIP13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 DNM1Q05193 864 aaKnown RBP13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 NFRKBQ6P4R8 1299 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 METTL7BQ6UX53 244 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 PIK3AP1Q6ZUJ8 805 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 NIPA1Q7RTP0 329 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 NOSTRINQ8IVI9 506 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 REXO1Q8N1G1 1221 aaKnown RBP13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 AFG1LQ8WV93 481 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 COPS5Q92905 334 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 GDF15Q99988 308 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 KATNAL1Q9BW62 490 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 BRMS1Q9HCU9 246 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 JADE2Q9NQC1 790 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 RTEL1Q9NZ71 1219 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 UBIAD1Q9Y5Z9 338 aa13.31□□□□□ -0.28
TUBA1C-203ENST00000548470 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 GGPS1O95749 300 aa13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 MMP3P08254 477 aa13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 CYP3A4P08684 503 aa13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 SREBF1P36956 1147 aa13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 CEBPZQ03701 1054 aaKnown RBP13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 FAAP100Q0VG06 881 aa13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 SPATA33Q96N06 139 aa13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 MXRA8Q9BRK3 442 aa13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 ANO3Q9BYT9 981 aa13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 FOXP1Q9H334 677 aaPredicted RBP13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 ZMYND8Q9ULU4 1186 aaPredicted RBP13.3□□□□□ -0.28
TUBA1C-203ENST00000548470 CD4P01730 458 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 ZNF76P36508 570 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 TOB1P50616 345 aaPredicted RBP13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 USP11P51784 963 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 SP2Q02086 613 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 MTMR1Q13613 665 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 INF2Q27J81 1249 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 CEP55Q53EZ4 464 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 SESTD1Q86VW0 696 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 FAM126BQ8IXS8 530 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 USP28Q96RU2 1077 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 PRO3102Q9H379 93 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 PDLIM7Q9NR12 457 aa13.29□□□□□ -0.28
TUBA1C-203ENST00000548470 LRRC37A2A6NM11 1700 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 FRMPD3Q5JV73 1810 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 CCDC194A0A1B0GVG4 234 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 MEIS1O00470 390 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 TIMP1P01033 207 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 RAG1P15918 1043 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 SYN1P17600 705 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 ITGB5P18084 799 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 MAGEA10P43363 369 aaPredicted RBP13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 NBPF20Q3BBV1 942 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 KRT25Q7Z3Z0 450 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 PRDM5Q9NQX1 630 aaPredicted RBP13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 CLIC4Q9Y696 253 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 MKI67P46013 3256 aaKnown RBP13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 GRIN2DO15399 1336 aa13.28□□□□□ -0.28
TUBA1C-203ENST00000548470 MCM3APO60318 1980 aa13.27□□□□□ -0.28
TUBA1C-203ENST00000548470 TRIM43BA6NCK2 446 aa13.27□□□□□ -0.29
TUBA1C-203ENST00000548470 EDIL3O43854 480 aa13.27□□□□□ -0.29
TUBA1C-203ENST00000548470 F2P00734 622 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms