RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 UIMC1Q96RL1 719 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 EHMT1Q9H9B1 1298 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 PKD2L1Q9P0L9 805 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 DNM1LO00429 736 aa19.7■□□□□ 0.74
HDAC7-227ENST00000548080 SPTLC2O15270 562 aa19.7■□□□□ 0.74
HDAC7-227ENST00000548080 TRAPPC10P48553 1259 aa19.7■□□□□ 0.74
HDAC7-227ENST00000548080 ATN1P54259 1190 aaPredicted RBP19.7■□□□□ 0.74
HDAC7-227ENST00000548080 SP2Q02086 613 aa19.7■□□□□ 0.74
HDAC7-227ENST00000548080 KRT25Q7Z3Z0 450 aa19.7■□□□□ 0.74
HDAC7-227ENST00000548080 KLHDC9Q8NEP7 349 aa19.7■□□□□ 0.74
HDAC7-227ENST00000548080 CYP2W1Q8TAV3 490 aa19.7■□□□□ 0.74
HDAC7-227ENST00000548080 INPP4AQ96PE3 977 aaPredicted RBP19.7■□□□□ 0.74
HDAC7-227ENST00000548080 SPC25Q9HBM1 224 aa19.7■□□□□ 0.74
HDAC7-227ENST00000548080 DDX41Q9UJV9 622 aaKnown RBP19.7■□□□□ 0.74
HDAC7-227ENST00000548080 ITGB5P18084 799 aa19.69■□□□□ 0.74
HDAC7-227ENST00000548080 ATP2B1P20020 1258 aa19.69■□□□□ 0.74
HDAC7-227ENST00000548080 SREBF1P36956 1147 aa19.69■□□□□ 0.74
HDAC7-227ENST00000548080 ARHGAP4P98171 946 aa19.69■□□□□ 0.74
HDAC7-227ENST00000548080 ARHGAP1Q07960 439 aa19.69■□□□□ 0.74
HDAC7-227ENST00000548080 PTPAQ15257 358 aa19.69■□□□□ 0.74
HDAC7-227ENST00000548080 FSCN1Q16658 493 aaKnown RBP19.69■□□□□ 0.74
HDAC7-227ENST00000548080 PCDH10Q9P2E7 1040 aa19.69■□□□□ 0.74
HDAC7-227ENST00000548080 DNAH12Q6ZR08 3092 aa19.68■□□□□ 0.74
HDAC7-227ENST00000548080 ASGR1P07306 291 aa19.68■□□□□ 0.74
HDAC7-227ENST00000548080 COL6A1P12109 1028 aa19.68■□□□□ 0.74
HDAC7-227ENST00000548080 UBA1P22314 1058 aaKnown RBP19.68■□□□□ 0.74
HDAC7-227ENST00000548080 ME1P48163 572 aa19.68■□□□□ 0.74
HDAC7-227ENST00000548080 MLLT1Q03111 559 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-227ENST00000548080 CCSAPQ6IQ19 270 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-227ENST00000548080 CEP131Q9UPN4 1083 aa19.68■□□□□ 0.74
HDAC7-227ENST00000548080 TELO2Q9Y4R8 837 aa19.68■□□□□ 0.74
HDAC7-227ENST00000548080 PCDHB6Q9Y5E3 794 aa19.68■□□□□ 0.74
HDAC7-227ENST00000548080 UBIAD1Q9Y5Z9 338 aa19.68■□□□□ 0.74
HDAC7-227ENST00000548080 A0A1W2PQ45 241 aaPredicted RBP19.67■□□□□ 0.74
HDAC7-227ENST00000548080 A0A1W2PQY0 241 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 GGPS1O95749 300 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 GH1P01241 217 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 ACLYP53396 1101 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 GNPTABQ3T906 1256 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 TPRNQ4KMQ1 711 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 TTC38Q5R3I4 469 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 XRRA1Q6P2D8 792 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 PPP1R13LQ8WUF5 828 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 AFG1LQ8WV93 481 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.67■□□□□ 0.74
HDAC7-227ENST00000548080 PCDHA7Q9UN72 937 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 PHF24Q9UPV7 400 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 NKRFO15226 690 aaKnown RBP eCLIP19.67■□□□□ 0.74
HDAC7-227ENST00000548080 PPP6R2O75170 966 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 STAM2O75886 525 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 BMP15O95972 392 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 MYL3P08590 195 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 CST5P28325 142 aaPredicted RBP19.67■□□□□ 0.74
HDAC7-227ENST00000548080 ZNF76P36508 570 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 SP4Q02446 784 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 NONOQ15233 471 aaKnown RBP eCLIP19.67■□□□□ 0.74
HDAC7-227ENST00000548080 LRRC26Q2I0M4 334 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 CXCL17Q6UXB2 119 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 NLRX1Q86UT6 975 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 DHX37Q8IY37 1157 aaKnown RBP19.67■□□□□ 0.74
HDAC7-227ENST00000548080 MXRA8Q9BRK3 442 aa19.67■□□□□ 0.74
HDAC7-227ENST00000548080 SPATA31C2B4DYI2 1134 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 EDIL3O43854 480 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 ATP9AO75110 1047 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 ARP10275 920 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 CYFIP1Q7L576 1253 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 TBCKQ8TEA7 893 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 CRYGNQ8WXF5 182 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 VTI1AQ96AJ9 217 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 JADE2Q9NQC1 790 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 Q9Y3F1 56 aa19.66■□□□□ 0.74
HDAC7-227ENST00000548080 MORC2Q9Y6X9 1032 aaPredicted RBP19.66■□□□□ 0.74
HDAC7-227ENST00000548080 PDE4DIPQ5VU43 2346 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 FAM86B1E9PN63 330 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 FAM86B2P0C5J1 330 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 CAPN2P17655 700 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 MARCKSP29966 332 aaPredicted RBP19.65■□□□□ 0.74
HDAC7-227ENST00000548080 ICAM3P32942 547 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 MTMR1Q13613 665 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 ZNF174Q15697 407 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 INF2Q27J81 1249 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 CELF3Q5SZQ8 465 aaKnown RBP19.65■□□□□ 0.74
HDAC7-227ENST00000548080 ADALQ6DHV7 355 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 MCTP2Q6DN12 878 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 TEX2Q8IWB9 1127 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 GPRASP2Q96D09 838 aa19.65■□□□□ 0.74
HDAC7-227ENST00000548080 A0A1W2PQ27 194 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 A0A1W2PQ64 194 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 A0A1W2PQD8 194 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 WNT7AO00755 349 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 MMP3P08254 477 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 CHMP4BP1P59074 171 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 PSMC6P62333 389 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 CEP55Q53EZ4 464 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 CAVIN1Q6NZI2 390 aaKnown RBP19.64■□□□□ 0.73
HDAC7-227ENST00000548080 PCSK9Q8NBP7 692 aaKnown RBP19.64■□□□□ 0.73
HDAC7-227ENST00000548080 DPF3Q92784 378 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 SPATA33Q96N06 139 aa19.64■□□□□ 0.73
HDAC7-227ENST00000548080 TSEN34Q9BSV6 310 aaKnown RBP19.64■□□□□ 0.73
HDAC7-227ENST00000548080 MLXIPQ9HAP2 919 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms