RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 UBXN6Q9BZV1 441 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 TSGA10Q9BZW7 698 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 SAR1BQ9Y6B6 198 aa17.2■□□□□ 0.34
BRF1-212ENST00000547562 COL2A1P02458 1487 aaPredicted RBP17.2■□□□□ 0.34
BRF1-212ENST00000547562 FRMD3A2A2Y4 597 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 FOSP01100 380 aaPredicted RBP17.19■□□□□ 0.34
BRF1-212ENST00000547562 BMP3P12645 472 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 SREBF1P36956 1147 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 MMP14P50281 582 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 SLC12A3P55017 1021 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 HERC4Q5GLZ8 1057 aaPredicted RBP17.19■□□□□ 0.34
BRF1-212ENST00000547562 RBM26Q5T8P6 1007 aaKnown RBP17.19■□□□□ 0.34
BRF1-212ENST00000547562 LENG9Q96B70 501 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 TANGO6Q9C0B7 1094 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 DUSP10Q9Y6W6 482 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 PITPNM2Q9BZ72 1349 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 ATAD5Q96QE3 1844 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 MYH10P35580 1976 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 POTEFA5A3E0 1075 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 LRRC53A6NM62 1247 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 RHOXF2BP0C7M4 288 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
BRF1-212ENST00000547562 CCDC40Q4G0X9 1142 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 POTEGQ6S5H5 508 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 POTEEQ6S8J3 1075 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 BTNL9Q6UXG8 535 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 RRAGAQ7L523 313 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 KRT26Q7Z3Y9 468 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 NOA1Q8NC60 698 aaKnown RBP17.19■□□□□ 0.34
BRF1-212ENST00000547562 C7orf43Q8WVR3 580 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 BAP1Q92560 729 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 RHOXF2Q9BQY4 288 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 EDEM3Q9BZQ6 932 aa17.19■□□□□ 0.34
BRF1-212ENST00000547562 PSME4Q14997 1843 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 ANO9A1A5B4 782 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 KIF20AO95235 890 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 LCA5LO95447 670 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 KIF11P52732 1056 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 ARSHQ5FYA8 562 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 CATSPER3Q86XQ3 398 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 NEK11Q8NG66 645 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 ERMNQ8TAM6 284 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 SCFD1Q8WVM8 642 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 PRMT6Q96LA8 375 aaPredicted RBP17.18■□□□□ 0.34
BRF1-212ENST00000547562 CSRNP1Q96S65 589 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 FAM86B1E9PN63 330 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 GNA14O95837 355 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 FAM86B2P0C5J1 330 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 EIF4A3P38919 411 aaKnown RBP17.18■□□□□ 0.34
BRF1-212ENST00000547562 KCNMA1Q12791 1236 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 RRP1BQ14684 758 aaKnown RBP17.18■□□□□ 0.34
BRF1-212ENST00000547562 ARHGAP27Q6ZUM4 889 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 NELFCDQ8IXH7 590 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 CCDC155Q8N6L0 562 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 SECISBP2LQ93073 1101 aaKnown RBP17.18■□□□□ 0.34
BRF1-212ENST00000547562 FAM20AQ96MK3 541 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
BRF1-212ENST00000547562 KCTD10Q9H3F6 313 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 EMILIN3Q9NT22 766 aa17.18■□□□□ 0.34
BRF1-212ENST00000547562 A0A1W2PRG0 241 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 MACROD2A1Z1Q3 448 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 OPLAHO14841 1288 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 ERLIN1O75477 346 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
BRF1-212ENST00000547562 RPA1P27694 616 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 MARSP56192 900 aaKnown RBP17.17■□□□□ 0.34
BRF1-212ENST00000547562 RAD51AP2Q09MP3 1159 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 BEND6Q5SZJ8 279 aaPredicted RBP17.17■□□□□ 0.34
BRF1-212ENST00000547562 PDXDC1Q6P996 788 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 DEF6Q9H4E7 631 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 PCDHA13Q9Y5I0 950 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
BRF1-212ENST00000547562 MAP2K7O14733 419 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 USO1O60763 962 aaKnown RBP17.17■□□□□ 0.34
BRF1-212ENST00000547562 TUBBP07437 444 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 CIITAP33076 1130 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 CACNA2D4Q7Z3S7 1137 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 SMCR8Q8TEV9 937 aaPredicted RBP17.17■□□□□ 0.34
BRF1-212ENST00000547562 SYNPO2Q9UMS6 1093 aa17.17■□□□□ 0.34
BRF1-212ENST00000547562 YDJCA8MPS7 323 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 SRGAP2O75044 1071 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 SPATA31C1P0DKV0 1188 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 TAL1P17542 331 aaPredicted RBP17.16■□□□□ 0.34
BRF1-212ENST00000547562 VSNL1P62760 191 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 FAM193AP78312 1265 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 ZNF771Q7L3S4 317 aaPredicted RBP17.16■□□□□ 0.34
BRF1-212ENST00000547562 ZC3H3Q8IXZ2 948 aaKnown RBP17.16■□□□□ 0.34
BRF1-212ENST00000547562 DNM3Q9UQ16 869 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 STK24Q9Y6E0 443 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 AKR1B10O60218 316 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 PSMC6P62333 389 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 SMC1AQ14683 1233 aaKnown RBP17.16■□□□□ 0.34
BRF1-212ENST00000547562 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 TRIM59Q8IWR1 403 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 SYT2Q8N9I0 419 aaPredicted RBP17.16■□□□□ 0.34
BRF1-212ENST00000547562 MMS19Q96T76 1030 aa17.16■□□□□ 0.34
BRF1-212ENST00000547562 SH2D4AQ9H788 454 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms