RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 KCNA2P16389 499 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 GNA11P29992 359 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 SREBF1P36956 1147 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 MTMR1Q13613 665 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 PSRC1Q6PGN9 363 aaPredicted RBP16.89■□□□□ 0.29
CCDC38-205ENST00000546947 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.29
CCDC38-205ENST00000546947 TRIM22Q8IYM9 498 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 C7orf31Q8N865 590 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 PPP1R13LQ8WUF5 828 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 PGBD1Q96JS3 809 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 RNPC3Q96LT9 517 aaKnown RBP16.89■□□□□ 0.29
CCDC38-205ENST00000546947 GPR20Q99678 358 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCDC38-205ENST00000546947 MXRA8Q9BRK3 442 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 C16orf70Q9BSU1 422 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 ALG1Q9BT22 464 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 WNT8AQ9H1J5 351 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 BCAS3Q9H6U6 928 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 IL23AQ9NPF7 189 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 HDAC6Q9UBN7 1215 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 NOD1Q9Y239 953 aa16.89■□□□□ 0.29
CCDC38-205ENST00000546947 TRIP12Q14669 1992 aaPredicted RBP16.89■□□□□ 0.29
CCDC38-205ENST00000546947 PITPNM1O00562 1244 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 CPLX1O14810 134 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 LGALS2P05162 132 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 CCL23P55773 120 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 SSRP1Q08945 709 aaKnown RBP16.88■□□□□ 0.29
CCDC38-205ENST00000546947 BFSP2Q13515 415 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 ANKRD1Q15327 319 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 PTGISQ16647 500 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 TMEM240Q5SV17 173 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 GDF6Q6KF10 455 aaPredicted RBP16.88■□□□□ 0.29
CCDC38-205ENST00000546947 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 BICD2Q8TD16 824 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
CCDC38-205ENST00000546947 SH3GLB2Q9NR46 395 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 TMEM260Q9NX78 707 aa16.88■□□□□ 0.29
CCDC38-205ENST00000546947 SCN5AQ14524 2016 aa16.87■□□□□ 0.29
CCDC38-205ENST00000546947 H3BRB1 525 aa16.87■□□□□ 0.29
CCDC38-205ENST00000546947 ATP9AO75110 1047 aa16.87■□□□□ 0.29
CCDC38-205ENST00000546947 STK3Q13188 491 aa16.87■□□□□ 0.29
CCDC38-205ENST00000546947 JAKMIP3Q5VZ66 844 aa16.87■□□□□ 0.29
CCDC38-205ENST00000546947 C16orf59Q7L2K0 433 aa16.87■□□□□ 0.29
CCDC38-205ENST00000546947 RPUSD2Q8IZ73 545 aaKnown RBP16.87■□□□□ 0.29
CCDC38-205ENST00000546947 RETREG2Q8NC44 543 aa16.87■□□□□ 0.29
CCDC38-205ENST00000546947 CAGE1Q8TC20 777 aa16.87■□□□□ 0.29
CCDC38-205ENST00000546947 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
CCDC38-205ENST00000546947 KAT6AQ92794 2004 aa16.86■□□□□ 0.29
CCDC38-205ENST00000546947 DEXIO95424 95 aa16.86■□□□□ 0.29
CCDC38-205ENST00000546947 PFKMP08237 780 aa16.86■□□□□ 0.29
CCDC38-205ENST00000546947 RFC2P35250 354 aa16.86■□□□□ 0.29
CCDC38-205ENST00000546947 SMAD3P84022 425 aaKnown RBP16.86■□□□□ 0.29
CCDC38-205ENST00000546947 ARHGAP4P98171 946 aa16.86■□□□□ 0.29
CCDC38-205ENST00000546947 CEP55Q53EZ4 464 aa16.86■□□□□ 0.29
CCDC38-205ENST00000546947 NIPA1Q7RTP0 329 aa16.86■□□□□ 0.29
CCDC38-205ENST00000546947 FAM177A1Q8N128 213 aaPredicted RBP16.86■□□□□ 0.29
CCDC38-205ENST00000546947 REXO1Q8N1G1 1221 aaKnown RBP16.86■□□□□ 0.29
CCDC38-205ENST00000546947 SCLYQ96I15 445 aa16.86■□□□□ 0.29
CCDC38-205ENST00000546947 SLKQ9H2G2 1235 aaPredicted RBP16.86■□□□□ 0.29
CCDC38-205ENST00000546947 KCNH7Q9NS40 1196 aa16.86■□□□□ 0.29
CCDC38-205ENST00000546947 ZNF215Q9UL58 517 aaPredicted RBP16.86■□□□□ 0.29
CCDC38-205ENST00000546947 PPFIA3O75145 1194 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 CDKL5O76039 1030 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 SEC24BO95487 1268 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 FGBP02675 491 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 CYP3A4P08684 503 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 ACRP10323 421 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 ZNF76P36508 570 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 AK2P54819 239 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 RBL2Q08999 1139 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 SCRN1Q12765 414 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 PTK7Q13308 1070 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 ZNF365Q70YC5 407 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 AFAP1L1Q8TED9 768 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 SEPT1Q8WYJ6 367 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 HERVK_113Q902F9 699 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 CTAGE1Q96RT6 745 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 MTIF3Q9H2K0 278 aaKnown RBP16.85■□□□□ 0.29
CCDC38-205ENST00000546947 VPS54Q9P1Q0 977 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 NFASCO94856 1347 aa16.85■□□□□ 0.29
CCDC38-205ENST00000546947 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.84■□□□□ 0.29
CCDC38-205ENST00000546947 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.84■□□□□ 0.29
CCDC38-205ENST00000546947 MEIS1O00470 390 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 PFKFB2O60825 505 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 IQCF3P0C7M6 154 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 TCF7P36402 384 aaPredicted RBP16.84■□□□□ 0.29
CCDC38-205ENST00000546947 NLRP5P59047 1200 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 SP4Q02446 784 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 UTP14CQ5TAP6 766 aaKnown RBP16.84■□□□□ 0.29
CCDC38-205ENST00000546947 RASIP1Q5U651 963 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 FAM109BQ6ICB4 259 aaPredicted RBP16.84■□□□□ 0.29
CCDC38-205ENST00000546947 CYP2W1Q8TAV3 490 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 CRYGNQ8WXF5 182 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 SDF4Q9BRK5 362 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 PKD2L1Q9P0L9 805 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 SLC9A2Q9UBY0 812 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 TPCN1Q9ULQ1 816 aa16.84■□□□□ 0.29
CCDC38-205ENST00000546947 GSTTP1A0A1W2PQM5 241 aa16.83■□□□□ 0.28
CCDC38-205ENST00000546947 C17orf102A2RUQ5 167 aa16.83■□□□□ 0.28
CCDC38-205ENST00000546947 ADAMTS3O15072 1205 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms