RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 KLRG1Q96E93 195 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 EIF2AK1Q9BQI3 630 aaKnown RBP13.34□□□□□ -0.27
CCDC38-202ENST00000546386 CRACR2AQ9BSW2 395 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC38-202ENST00000546386 PSMA7O14818 248 aa13.33□□□□□ -0.27
CCDC38-202ENST00000546386 GAS7O60861 476 aa13.33□□□□□ -0.27
CCDC38-202ENST00000546386 ENOX2Q16206 610 aaKnown RBP13.33□□□□□ -0.27
CCDC38-202ENST00000546386 CDKAL1Q5VV42 579 aa13.33□□□□□ -0.27
CCDC38-202ENST00000546386 TC2NQ8N9U0 490 aa13.33□□□□□ -0.27
CCDC38-202ENST00000546386 PAGR1Q9BTK6 254 aa13.33□□□□□ -0.27
CCDC38-202ENST00000546386 VPS33BQ9H267 617 aa13.33□□□□□ -0.27
CCDC38-202ENST00000546386 RWDD2AQ9UIY3 292 aa13.33□□□□□ -0.27
CCDC38-202ENST00000546386 UQCRHLA0A096LP55 91 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 TRAF5O00463 557 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 VWA5AO00534 786 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.28
CCDC38-202ENST00000546386 UQCRHP07919 91 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 SOX10P56693 466 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 MRPS9P82933 396 aaKnown RBP13.33□□□□□ -0.28
CCDC38-202ENST00000546386 COASYQ13057 564 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 PDIA5Q14554 519 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 ZC2HC1CQ53FD0 456 aaPredicted RBP13.33□□□□□ -0.28
CCDC38-202ENST00000546386 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.33□□□□□ -0.28
CCDC38-202ENST00000546386 SCYL3Q8IZE3 742 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 DNAJC19Q96DA6 116 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 UNC45AQ9H3U1 944 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 KCNH7Q9NS40 1196 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 RMND1Q9NWS8 449 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.28
CCDC38-202ENST00000546386 IPO5O00410 1097 aaKnown RBP13.32□□□□□ -0.28
CCDC38-202ENST00000546386 PRPF6O94906 941 aaKnown RBP13.32□□□□□ -0.28
CCDC38-202ENST00000546386 ICAM1P05362 532 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 COPB1P53618 953 aaKnown RBP13.32□□□□□ -0.28
CCDC38-202ENST00000546386 CEP55Q53EZ4 464 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 WDR78Q5VTH9 848 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 TTI2Q6NXR4 508 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 ILDR2Q71H61 639 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 RMDN3Q96TC7 470 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 REEP2Q9BRK0 252 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 SH2D4AQ9H788 454 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 VAV3Q9UKW4 847 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 MRPL11Q9Y3B7 192 aaKnown RBP13.32□□□□□ -0.28
CCDC38-202ENST00000546386 BRCA1P38398 1863 aaKnown RBP13.32□□□□□ -0.28
CCDC38-202ENST00000546386 A0A1B0GTH6 734 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 IRF6O14896 467 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 CLIC2O15247 247 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 GYPCP04921 128 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 CYP11B2P19099 503 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 MTIF2P46199 727 aaKnown RBP13.32□□□□□ -0.28
CCDC38-202ENST00000546386 AP3B2Q13367 1082 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 TMEM132BQ14DG7 1078 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 GADL1Q6ZQY3 521 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 OTOP1Q7RTM1 612 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 ELOA2Q8IYF1 753 aaPredicted RBP13.32□□□□□ -0.28
CCDC38-202ENST00000546386 C7orf25Q9BPX7 421 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 KIAA1683Q9H0B3 1180 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 LZTFL1Q9NQ48 299 aa13.32□□□□□ -0.28
CCDC38-202ENST00000546386 CBFA2T2O43439 604 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 SLITRK3O94933 977 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 MYBP10242 640 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 AMPD3Q01432 767 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 CNTN2Q02246 1040 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 MAP3K10Q02779 954 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 SULF1Q8IWU6 871 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 P2RX5Q93086 422 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 CNOT6LQ96LI5 555 aaKnown RBP13.31□□□□□ -0.28
CCDC38-202ENST00000546386 SLC38A10Q9HBR0 1119 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 FAM207AQ9NSI2 230 aaPredicted RBP13.31□□□□□ -0.28
CCDC38-202ENST00000546386 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 PPP1R9AQ9ULJ8 1098 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 USP20Q9Y2K6 914 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 TMEM119Q4V9L6 283 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.31□□□□□ -0.28
CCDC38-202ENST00000546386 SFR1Q86XK3 245 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
CCDC38-202ENST00000546386 SYTL5Q8TDW5 730 aaPredicted RBP13.31□□□□□ -0.28
CCDC38-202ENST00000546386 SMCR8Q8TEV9 937 aaPredicted RBP13.31□□□□□ -0.28
CCDC38-202ENST00000546386 DCPSQ96C86 337 aaKnown RBP13.31□□□□□ -0.28
CCDC38-202ENST00000546386 BAG1Q99933 345 aaPredicted RBP13.31□□□□□ -0.28
CCDC38-202ENST00000546386 TUBGCP2Q9BSJ2 902 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 RNF146Q9NTX7 359 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 DNM3Q9UQ16 869 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 PSME4Q14997 1843 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 KIF13BQ9NQT8 1826 aa13.31□□□□□ -0.28
CCDC38-202ENST00000546386 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
CCDC38-202ENST00000546386 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
CCDC38-202ENST00000546386 NMT1P30419 496 aaKnown RBP13.3□□□□□ -0.28
CCDC38-202ENST00000546386 ITGB3BPQ13352 177 aaPredicted RBP13.3□□□□□ -0.28
CCDC38-202ENST00000546386 STIM1Q13586 685 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 SYT10Q6XYQ8 523 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 RNF207Q6ZRF8 634 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 RDH13Q8NBN7 331 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 CHP1Q99653 195 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 TISP43B9A030 160 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
CCDC38-202ENST00000546386 EPHB6O15197 1021 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 TFRCP02786 760 aaKnown RBP13.3□□□□□ -0.28
CCDC38-202ENST00000546386 COG2Q14746 738 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms