RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MYO5AQ9Y4I1 1855 aaKnown RBP7.18□□□□□ -1.26
SNHG1-225ENST00000545920 SSU72P8A0A1W2PR75 194 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 TTC24A2A3L6 582 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-225ENST00000545920 GRID2IPA4D2P6 1211 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 MINDY4BA8MYZ0 360 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 PJA2O43164 708 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 PRPF6O94906 941 aaKnown RBP7.18□□□□□ -1.26
SNHG1-225ENST00000545920 CAMTA2O94983 1202 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 ADAMTS2O95450 1211 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 NTSR2O95665 410 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 TRIM21P19474 475 aaKnown RBP7.18□□□□□ -1.26
SNHG1-225ENST00000545920 ATP2B1P20020 1258 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 GNA11P29992 359 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 SCNN1AP37088 669 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 CCT6AP40227 531 aaKnown RBP7.18□□□□□ -1.26
SNHG1-225ENST00000545920 USP8P40818 1118 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 TNNT3P45378 269 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-225ENST00000545920 EPHB4P54760 987 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 CORO7P57737 925 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 GSTO1P78417 241 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 LRRC63Q05C16 580 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 USP4Q13107 963 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 GRM4Q14833 912 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 OXLD1Q5BKU9 147 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 SLC10A5Q5PT55 438 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 EMC10Q5UCC4 262 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 CCNI2Q6ZMN8 369 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-225ENST00000545920 FBXO33Q7Z6M2 555 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 ACRBPQ8NEB7 543 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 TPCN2Q8NHX9 752 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 FAM76AQ8TAV0 307 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 CPLX3Q8WVH0 158 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 FOXJ1Q92949 421 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 SECISBP2LQ93073 1101 aaKnown RBP7.18□□□□□ -1.26
SNHG1-225ENST00000545920 P2RX5Q93086 422 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 CAVIN3Q969G5 261 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 NAP1L4Q99733 375 aaKnown RBP7.18□□□□□ -1.26
SNHG1-225ENST00000545920 SLF1Q9BQI6 1058 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 TUBGCP2Q9BSJ2 902 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 SPZ1Q9BXG8 430 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 RAB34Q9BZG1 259 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 VPS16Q9H269 839 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 KAT14Q9H8E8 782 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 RIC8AQ9NPQ8 531 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 SEC31BQ9NQW1 1179 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 TAB2Q9NYJ8 693 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 GGA2Q9UJY4 613 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 HPCAL4Q9UM19 191 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 GUCA1BQ9UMX6 200 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 PLAGL2Q9UPG8 496 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 FAN1Q9Y2M0 1017 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 HYOU1Q9Y4L1 999 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 CHD4Q14839 1912 aa7.18□□□□□ -1.26
SNHG1-225ENST00000545920 A0A087WUV0 522 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 SFI1A8K8P3 1242 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 EXOC5O00471 708 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 KLRC4O43908 158 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 PRMT3O60678 531 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 ICMTO60725 284 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 PLEKHA8P1O95397 391 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 GNA14O95837 355 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 RHOXF2BP0C7M4 288 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 WEE1P30291 646 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 PAFAH1B1P43034 410 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 SKOR1P84550 965 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 TBC1D8BQ0IIM8 1120 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 NBPF20Q3BBV1 942 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 HSP90AA4PQ58FG1 418 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 C10orf76Q5T2E6 689 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 SUSD4Q5VX71 490 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 CENPPQ6IPU0 288 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 WDR59Q6PJI9 974 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 PIK3AP1Q6ZUJ8 805 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 B4GALNT4Q76KP1 1039 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 IRF2BP1Q8IU81 584 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 NPAS4Q8IUM7 802 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 TEX2Q8IWB9 1127 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 GUF1Q8N442 669 aaKnown RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 SRBD1Q8N5C6 995 aaKnown RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 CSGALNACT2Q8N6G5 542 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 C3orf20Q8ND61 904 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 CAGE1Q8TC20 777 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 AENQ8WTP8 325 aaKnown RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 CALML4Q96GE6 196 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 CCDC42Q96M95 316 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 RHOXF2Q9BQY4 288 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 ZKSCAN3Q9BRR0 538 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 TACO1Q9BSH4 297 aaKnown RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 NYXQ9GZU5 481 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 YY1AP1Q9H869 796 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 FAM204AQ9H8W3 233 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 NHEJ1Q9H9Q4 299 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 ZCCHC17Q9NP64 241 aaKnown RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 ATP13A2Q9NQ11 1180 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 BARHL2Q9NY43 387 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 KIAA1522Q9P206 1035 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 CDV3Q9UKY7 258 aaKnown RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 SNX12Q9UMY4 172 aa7.17□□□□□ -1.26
SNHG1-225ENST00000545920 REXO2Q9Y3B8 237 aaKnown RBP7.17□□□□□ -1.26
SNHG1-225ENST00000545920 ABCA3Q99758 1704 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms