RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.04
HCFC2-202ENST00000544223 AS3MTQ9HBK9 375 aa15.27■□□□□ 0.04
HCFC2-202ENST00000544223 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.04
HCFC2-202ENST00000544223 KCNJ18B7U540 433 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 GAS7O60861 476 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 ATP9AO75110 1047 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 KCNJ12Q14500 433 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 KCNB1Q14721 858 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 DNTTIP2Q5QJE6 756 aaKnown RBP15.27■□□□□ 0.03
HCFC2-202ENST00000544223 GADL1Q6ZQY3 521 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 CDCA5Q96FF9 252 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 RMDN3Q96TC7 470 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 CUEDC2Q9H467 287 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 STK17AQ9UEE5 414 aa15.27■□□□□ 0.03
HCFC2-202ENST00000544223 ZNF214Q9UL59 606 aaPredicted RBP15.27■□□□□ 0.03
HCFC2-202ENST00000544223 IPO5O00410 1097 aaKnown RBP15.26■□□□□ 0.03
HCFC2-202ENST00000544223 PSMD10O75832 226 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 CYP11B2P19099 503 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 CASP5P51878 434 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 MAP3K9P80192 1104 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 AMPD3Q01432 767 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 SP4Q02446 784 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
HCFC2-202ENST00000544223 NR1I3Q14994 352 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 RNF207Q6ZRF8 634 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 MAEAQ7L5Y9 396 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 REPS2Q8NFH8 660 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 RUSC1Q9BVN2 902 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 TESPA1A2RU30 521 aaPredicted RBP15.26■□□□□ 0.03
HCFC2-202ENST00000544223 SPDYE16A6NNV3 312 aaPredicted RBP15.26■□□□□ 0.03
HCFC2-202ENST00000544223 RNF225M0QZC1 329 aaPredicted RBP15.26■□□□□ 0.03
HCFC2-202ENST00000544223 SLITRK3O94933 977 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 KRT18P05783 430 aaKnown RBP15.26■□□□□ 0.03
HCFC2-202ENST00000544223 DSG3P32926 999 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 SLC12A3P55017 1021 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 COASYQ13057 564 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 MAP1SQ66K74 1059 aaPredicted RBP15.26■□□□□ 0.03
HCFC2-202ENST00000544223 TTI2Q6NXR4 508 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 MOXD1Q6UVY6 613 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 CATSPERGQ6ZRH7 1159 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 C16orf45Q96MC5 204 aaPredicted RBP15.26■□□□□ 0.03
HCFC2-202ENST00000544223 PANK4Q9NVE7 773 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 TMOD4Q9NZQ9 345 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 ADD3Q9UEY8 706 aaKnown RBP15.26■□□□□ 0.03
HCFC2-202ENST00000544223 DOCK5Q9H7D0 1870 aa15.26■□□□□ 0.03
HCFC2-202ENST00000544223 COG2Q14746 738 aa15.25■□□□□ 0.03
HCFC2-202ENST00000544223 TCP11X2Q5H9J9 407 aa15.25■□□□□ 0.03
HCFC2-202ENST00000544223 UNC13DQ70J99 1090 aa15.25■□□□□ 0.03
HCFC2-202ENST00000544223 A0A1B0GTH6 734 aa15.25■□□□□ 0.03
HCFC2-202ENST00000544223 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
HCFC2-202ENST00000544223 ECM2O94769 699 aaPredicted RBP15.25■□□□□ 0.03
HCFC2-202ENST00000544223 PGM5Q15124 567 aa15.25■□□□□ 0.03
HCFC2-202ENST00000544223 HERC4Q5GLZ8 1057 aaPredicted RBP15.25■□□□□ 0.03
HCFC2-202ENST00000544223 CSGALNACT2Q8N6G5 542 aa15.25■□□□□ 0.03
HCFC2-202ENST00000544223 FAM20AQ96MK3 541 aa15.25■□□□□ 0.03
HCFC2-202ENST00000544223 NAP1L4Q99733 375 aaKnown RBP15.25■□□□□ 0.03
HCFC2-202ENST00000544223 MXRA8Q9BRK3 442 aa15.25■□□□□ 0.03
HCFC2-202ENST00000544223 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
HCFC2-202ENST00000544223 R3HCC1Q9Y3T6 440 aaKnown RBP15.25■□□□□ 0.03
HCFC2-202ENST00000544223 PSMA7O14818 248 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 N4BP3O15049 544 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 SFPQP23246 707 aaKnown RBP eCLIP15.24■□□□□ 0.03
HCFC2-202ENST00000544223 RPA1P27694 616 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 KLK7P49862 253 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 TKFCQ3LXA3 575 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 KSR1Q8IVT5 923 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 SLC5A5Q92911 643 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 REEP2Q9BRK0 252 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 CSADQ9Y600 493 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 WDR90Q96KV7 1748 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 PTPRFP10586 1907 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 CBFA2T2O43439 604 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 CNTN2Q02246 1040 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 HYIQ5T013 277 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 ARHGEF16Q5VV41 709 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 P2RX5Q93086 422 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 NT5C3AQ9H0P0 336 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 BTBD7Q9P203 1132 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 DNM3Q9UQ16 869 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 SAMM50Q9Y512 469 aa15.24■□□□□ 0.03
HCFC2-202ENST00000544223 RBL2Q08999 1139 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 KCNA1Q09470 495 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 SPECC1LQ69YQ0 1117 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 HSD17B14Q9BPX1 270 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 MAGEF1Q9HAY2 307 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 RBBP6Q7Z6E9 1792 aaKnown RBP15.23■□□□□ 0.03
HCFC2-202ENST00000544223 TBX3O15119 743 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 COPB1P53618 953 aaKnown RBP15.23■□□□□ 0.03
HCFC2-202ENST00000544223 MTMR1Q13613 665 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 HAUS3Q68CZ6 603 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 CNNM4Q6P4Q7 775 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 PXMP2Q9NR77 195 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 KDM3AQ9Y4C1 1321 aa15.23■□□□□ 0.03
HCFC2-202ENST00000544223 B4DLN1 442 aa15.22■□□□□ 0.03
HCFC2-202ENST00000544223 RBAK-RBAKDNI3L0D1 243 aa15.22■□□□□ 0.03
HCFC2-202ENST00000544223 DHX15O43143 795 aaKnown RBP15.22■□□□□ 0.03
HCFC2-202ENST00000544223 MYL1P05976 194 aa15.22■□□□□ 0.03
HCFC2-202ENST00000544223 PRKCSHP14314 528 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms