RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CEP55Q53EZ4 464 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 METTL7BQ6UX53 244 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 PLA2G4DQ86XP0 818 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 BLIDQ8IZY5 108 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 GIMAP8Q8ND71 665 aaPredicted RBP12.59□□□□□ -0.39
DDB1-222ENST00000543627 GTF3C6Q969F1 213 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 GDF15Q99988 308 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 SDF4Q9BRK5 362 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 KATNAL1Q9BW62 490 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 HIPK3Q9H422 1215 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 SH3GLB2Q9NR46 395 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 KCNH7Q9NS40 1196 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 PCDHA4Q9UN74 947 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 KIAA0355O15063 1070 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 TIMP1P01033 207 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 SUPT20HL2P0C7V6 817 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 MARK3P27448 753 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 SREBF1P36956 1147 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 TRIM29Q14134 588 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 PTGISQ16647 500 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 PRR16Q569H4 304 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 MCTP2Q6DN12 878 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 WASF1Q92558 559 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 KAT2BQ92831 832 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 GLG1Q92896 1179 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
DDB1-222ENST00000543627 GPR20Q99678 358 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 HDAC6Q9UBN7 1215 aa12.58□□□□□ -0.4
DDB1-222ENST00000543627 H3BRB1 525 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 ST18O60284 1047 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 CD4P01730 458 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 LGALS2P05162 132 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 ACRP10323 421 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 KCNA2P16389 499 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 TCF7P36402 384 aaPredicted RBP12.57□□□□□ -0.4
DDB1-222ENST00000543627 RBM25P49756 843 aaKnown RBP12.57□□□□□ -0.4
DDB1-222ENST00000543627 ZNF200P98182 395 aaPredicted RBP12.57□□□□□ -0.4
DDB1-222ENST00000543627 GUCY1B3Q02153 619 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 FPGSQ05932 587 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 GDF6Q6KF10 455 aaPredicted RBP12.57□□□□□ -0.4
DDB1-222ENST00000543627 NFRKBQ6P4R8 1299 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
DDB1-222ENST00000543627 TRIM50Q86XT4 487 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 TMEM199Q8N511 208 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 SLC43A3Q8NBI5 491 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 RETREG2Q8NC44 543 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 NSUN7Q8NE18 718 aaKnown RBP12.57□□□□□ -0.4
DDB1-222ENST00000543627 TBCKQ8TEA7 893 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 SEPT1Q8WYJ6 367 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 KIF2CQ99661 725 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 SENP7Q9BQF6 1050 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 ZNF577Q9BSK1 485 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 TUT1Q9H6E5 874 aaKnown RBP12.57□□□□□ -0.4
DDB1-222ENST00000543627 AGO4Q9HCK5 861 aaKnown RBP12.57□□□□□ -0.4
DDB1-222ENST00000543627 SLC9A2Q9UBY0 812 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 TCEAL9Q9UHQ7 104 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 UMODL1Q5DID0 1318 aa12.57□□□□□ -0.4
DDB1-222ENST00000543627 CCDC194A0A1B0GVG4 234 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 FAM86B1E9PN63 330 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 MAFGO15525 162 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 FAM86B2P0C5J1 330 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 CSF2RAP15509 400 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 RABEP1Q15276 862 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 SHHQ15465 462 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 TDHQ8IZJ6 230 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 FAM184AQ8NB25 1140 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 IL17RAQ96F46 866 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 SCLYQ96I15 445 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
DDB1-222ENST00000543627 SEZ6LQ9BYH1 1024 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 JPH1Q9HDC5 661 aaPredicted RBP12.56□□□□□ -0.4
DDB1-222ENST00000543627 TBX21Q9UL17 535 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 DOCK5Q9H7D0 1870 aa12.56□□□□□ -0.4
DDB1-222ENST00000543627 GSTTP1A0A1W2PQM5 241 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 MEIS1O00470 390 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 BACH1O14867 736 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 MARCH6O60337 910 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 F2P00734 622 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 FDPSP14324 419 aaKnown RBP12.55□□□□□ -0.4
DDB1-222ENST00000543627 BMP8BP34820 402 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 IGBP1P78318 339 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 PTPN11Q06124 597 aaPredicted RBP12.55□□□□□ -0.4
DDB1-222ENST00000543627 NONOQ15233 471 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDB1-222ENST00000543627 INF2Q27J81 1249 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 LETM2Q2VYF4 491 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 C9orf50Q5SZB4 431 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 MFSD5Q6N075 450 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 PIK3AP1Q6ZUJ8 805 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 DEFB128Q7Z7B8 93 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 OXER1Q8TDS5 423 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 AZI2Q9H6S1 392 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 BRMS1Q9HCU9 246 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
DDB1-222ENST00000543627 SAMM50Q9Y512 469 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 STK36Q9NRP7 1315 aa12.55□□□□□ -0.4
DDB1-222ENST00000543627 C17orf102A2RUQ5 167 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 IPO5O00410 1097 aaKnown RBP12.54□□□□□ -0.4
DDB1-222ENST00000543627 CHMP2AO43633 222 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms