RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ECEL1O95672 775 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 DIP2BQ9P265 1576 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 PDE6CP51160 858 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 EXOSC10Q01780 885 aaKnown RBP21.03■□□□□ 0.96
SUDS3-204ENST00000543473 CYP4A11Q02928 519 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 LLGL1Q15334 1064 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 MMS19Q96T76 1030 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 BCS1LQ9Y276 419 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 OVOS2A0A0J9YW53 1432 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 OVOS2Q6IE36 1432 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 A0A1B0GTH6 734 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 AP5Z1O43299 807 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 CACNB1Q02641 598 aaPredicted RBP21.03■□□□□ 0.96
SUDS3-204ENST00000543473 STRN3Q13033 797 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 SYNE4Q8N205 404 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 SPATA4Q8NEY3 305 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 HVCN1Q96D96 273 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 IWS1Q96ST2 819 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 FHOD1Q9Y613 1164 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 MEFVO15553 781 aaPredicted RBP21.02■□□□□ 0.96
SUDS3-204ENST00000543473 GFPT2O94808 682 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 PLEKHA8P1O95397 391 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 CD19P15391 556 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 MAGOHP61326 146 aaKnown RBP21.02■□□□□ 0.96
SUDS3-204ENST00000543473 RNASELQ05823 741 aaKnown RBP21.02■□□□□ 0.96
SUDS3-204ENST00000543473 ADCY2Q08462 1091 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 GRM1Q13255 1194 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 RASA3Q14644 834 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 CYP4F22Q6NT55 531 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 CCDC97Q96F63 343 aaPredicted RBP21.02■□□□□ 0.96
SUDS3-204ENST00000543473 PICK1Q9NRD5 415 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 KLC4Q9NSK0 619 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 TBK1Q9UHD2 729 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 USP42Q9H9J4 1324 aaKnown RBP21.02■□□□□ 0.96
SUDS3-204ENST00000543473 MYO3AQ8NEV4 1616 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 MAN1A1P33908 653 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 DYNLL1P63167 89 aaKnown RBP21.02■□□□□ 0.96
SUDS3-204ENST00000543473 PABPC4Q13310 644 aaKnown RBP eCLIP21.02■□□□□ 0.96
SUDS3-204ENST00000543473 FBXW10Q5XX13 1052 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 LRRC47Q8N1G4 583 aaKnown RBP21.02■□□□□ 0.96
SUDS3-204ENST00000543473 ATP2A3Q93084 1043 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 ATP6V1G3Q96LB4 118 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 SLC24A3Q9HC58 644 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 SCOCQ9UIL1 159 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 CASC4Q6P4E1 433 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 CLEC4GQ6UXB4 293 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 RASGRP2Q7LDG7 609 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 RIN2Q8WYP3 895 aaPredicted RBP21.02■□□□□ 0.96
SUDS3-204ENST00000543473 BCAP29Q9UHQ4 241 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 TUBE1Q9UJT0 475 aa21.02■□□□□ 0.96
SUDS3-204ENST00000543473 FGGP02679 453 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 TTC16Q8NEE8 873 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 AFF2P51816 1311 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 TNNI1P19237 187 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 FMR1Q06787 632 aaKnown RBP eCLIP21.01■□□□□ 0.95
SUDS3-204ENST00000543473 BEND6Q5SZJ8 279 aaPredicted RBP21.01■□□□□ 0.95
SUDS3-204ENST00000543473 GDAP1Q8TB36 358 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 UBN2Q6ZU65 1347 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 LRRC53A6NM62 1247 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 NCK2O43639 380 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 SKIP12755 728 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 SGO2Q562F6 1265 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 RPUSD2Q8IZ73 545 aaKnown RBP21.01■□□□□ 0.95
SUDS3-204ENST00000543473 PDCD7Q8N8D1 485 aaKnown RBP21.01■□□□□ 0.95
SUDS3-204ENST00000543473 SAAL1Q96ER3 474 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 ZC3H13Q5T200 1668 aaKnown RBP21.01■□□□□ 0.95
SUDS3-204ENST00000543473 MYO1FO00160 1098 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 RPS6KA4O75676 772 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 MCAMP43121 646 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 POLE2P56282 527 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 GUCY1A3Q02108 690 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 PSMD2Q13200 908 aa21.01■□□□□ 0.95
SUDS3-204ENST00000543473 PPEF1O14829 653 aaPredicted RBP21■□□□□ 0.95
SUDS3-204ENST00000543473 PPP2R2AP63151 447 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 RAD9BQ6WBX8 426 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 EMILIN3Q9NT22 766 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 CYP19A1P11511 503 aaPredicted RBP21■□□□□ 0.95
SUDS3-204ENST00000543473 SNX1Q13596 522 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 PARP9Q8IXQ6 854 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 FAM186BQ8IYM0 893 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 PPP1R37O75864 691 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 BBOX1O75936 387 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 OTUD6AQ7L8S5 288 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 CHP1Q99653 195 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 LRRN2O75325 713 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 CCDC127Q96BQ5 260 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 PTPRUQ92729 1446 aa21■□□□□ 0.95
SUDS3-204ENST00000543473 KCNQ2O43526 872 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 COG7P83436 770 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 MYL7Q01449 175 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 PRKG1Q13976 671 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 LRRC1Q9BTT6 524 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.99■□□□□ 0.95
SUDS3-204ENST00000543473 CRB1P82279 1406 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 NEDD4P46934 1319 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 CYP2D7A0A087X1C5 515 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 GFPT1Q06210 699 aaPredicted RBP20.99■□□□□ 0.95
SUDS3-204ENST00000543473 BFSP1Q12934 665 aa20.99■□□□□ 0.95
SUDS3-204ENST00000543473 TMED2Q15363 201 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms