RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CENPHQ9H3R5 247 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 GOLPH3LQ9H4A5 285 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 RPAP3Q9H6T3 665 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 IFT122Q9HBG6 1241 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 HELLSQ9NRZ9 838 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 COMMD8Q9NX08 183 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 DNAJB12Q9NXW2 375 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 DDX20Q9UHI6 824 aaKnown RBP4.81□□□□□ -1.64
SNHG1-219ENST00000542112 PNMA2Q9UL42 364 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 CARD8Q9Y2G2 431 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 MRFAP1Q9Y605 127 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 FANCAO15360 1455 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 TEX14Q8IWB6 1497 aa4.81□□□□□ -1.64
SNHG1-219ENST00000542112 SPHKAPQ2M3C7 1700 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 TET3O43151 1660 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 HECW2Q9P2P5 1572 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ANKRD62A6NC57 917 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ADARB2-AS1A8MUL3 147 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ZBTB42B2RXF5 422 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 E7ENQ6 273 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 M0R2C6 588 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 NFKBIEO00221 500 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 PDE2AO00408 941 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 DIAPH2O60879 1101 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 SMIM24O75264 130 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 FLOT1O75955 427 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 RPSAP08865 295 aaKnown RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 GHRP10912 638 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 POLR2EP19388 210 aaKnown RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ITPKAP23677 461 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ALDH3A1P30838 453 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 KRT9P35527 623 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 EVCP57679 992 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 SULT2A1Q06520 285 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ZBTB17Q13105 803 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 CUL4AQ13619 759 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 TUBA3CQ13748 450 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 TRIM29Q14134 588 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 WTAPQ15007 396 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ARHGEF6Q15052 776 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 CCDC85BQ15834 202 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 TRIM71Q2Q1W2 868 aaKnown RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 GNPTABQ3T906 1256 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 RPS26P11Q5JNZ5 115 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 SPDYCQ5MJ68 293 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 AKNAD1Q5T1N1 836 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 NXNQ6DKJ4 435 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 OLFML1Q6UWY5 402 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 SV2BQ7L1I2 683 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ERMP1Q7Z2K6 904 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ITPRIPQ8IWB1 547 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 MSANTD4Q8NCY6 345 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ACMSDQ8TDX5 336 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 DIS3LQ8TF46 1054 aaKnown RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 IFT81Q8WYA0 676 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 RSRP1Q9BUV0 290 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 RTFDC1Q9BY42 306 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 MIS12Q9H081 205 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 TAOK3Q9H2K8 898 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 IGFLR1Q9H665 355 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 DCTPP1Q9H773 170 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 SYNCQ9H7C4 482 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ZCCHC17Q9NP64 241 aaKnown RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 SLC39A2Q9NP94 309 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 MBIPQ9NS73 344 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 ZBTB40Q9NUA8 1239 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 TBCCD1Q9NVR7 557 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 NOP53Q9NZM5 478 aaKnown RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 TBC1D7Q9P0N9 293 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 RABL2AQ9UBK7 228 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 NXF1Q9UBU9 619 aaKnown RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 L1RE1Q9UN81 338 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 SATB2Q9UPW6 733 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 SH3GLB1Q9Y371 365 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 LUC7L2Q9Y383 392 aaKnown RBP4.8□□□□□ -1.64
SNHG1-219ENST00000542112 NEO1Q92859 1461 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 UHRF1BP1Q6BDS2 1440 aa4.8□□□□□ -1.64
SNHG1-219ENST00000542112 DIP2CQ9Y2E4 1556 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 GPR75-ASB3A0A0A6YYF3 556 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 CFAP69A5D8W1 941 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 GOLGA8KD6RF30 607 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 H3BQF6 201 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 C2CD2LO14523 706 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 EIF3HO15372 352 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 PRPF3O43395 683 aaKnown RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 MBD4O95243 580 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 GNAT1P11488 350 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 ACPPP15309 386 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 EIF2AK2P19525 551 aaKnown RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 BDNFP23560 247 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 S100A5P33763 92 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 HSPA4P34932 840 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 GRIA4P48058 902 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 SERPINB8P50452 374 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 OXCT1P55809 520 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 PDE1BQ01064 536 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 MLLT1Q03111 559 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 KIF5AQ12840 1032 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 XRCC4Q13426 336 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 STIM1Q13586 685 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms