RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 FKBP3Q00688 224 aaKnown RBP12.01□□□□□ -0.49
NECAP1-206ENST00000542095 TNIP1Q15025 636 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 HERC4Q5GLZ8 1057 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-206ENST00000542095 KCTD17Q8N5Z5 321 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 GLIS3Q8NEA6 775 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 SLF1Q9BQI6 1058 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 CCDC94Q9BW85 323 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-206ENST00000542095 NDST4Q9H3R1 872 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-206ENST00000542095 VAV3Q9UKW4 847 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 PCDHA2Q9Y5H9 948 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 SPATA31C1P0DKV0 1188 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 KLK7P49862 253 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 MEA1Q16626 185 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 KIF4BQ2VIQ3 1234 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 ZCWPW2Q504Y3 356 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 SYT2Q8N9I0 419 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-206ENST00000542095 POLR3CQ9BUI4 534 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-206ENST00000542095 AGPAT5Q9NUQ2 364 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 MYO1AQ9UBC5 1043 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 MRFAP1Q9Y605 127 aa12.01□□□□□ -0.49
NECAP1-206ENST00000542095 IGLV3-22A0A075B6J6 115 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 NPHP3-ACAD11A0A0J9YXS1 232 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 RASSF10A6NK89 507 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 TNFAIP1Q13829 316 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 ARSHQ5FYA8 562 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 CCDC84Q86UT8 332 aaPredicted RBP12□□□□□ -0.49
NECAP1-206ENST00000542095 CYP2W1Q8TAV3 490 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 CEP63Q96MT8 703 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 FEZ1Q99689 392 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 IRX2Q9BZI1 471 aaPredicted RBP12□□□□□ -0.49
NECAP1-206ENST00000542095 TBC1D7Q9P0N9 293 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 COL4A3BPQ9Y5P4 624 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 A0A0U1RQJ8 604 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 TRAF5O00463 557 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 GNA14O95837 355 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 POLD1P28340 1107 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 CYLC1P35663 651 aaPredicted RBP12□□□□□ -0.49
NECAP1-206ENST00000542095 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
NECAP1-206ENST00000542095 PABPC4Q13310 644 aaKnown RBP eCLIP12□□□□□ -0.49
NECAP1-206ENST00000542095 ERCC6LQ2NKX8 1250 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 ZNF569Q5MCW4 686 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 WDR59Q6PJI9 974 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 LDHDQ86WU2 507 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 LRRN4CLQ8ND94 238 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 ATRIPQ8WXE1 791 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 UBXN4Q92575 508 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 TBC1D5Q92609 795 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 EIF2AK1Q9BQI3 630 aaKnown RBP12□□□□□ -0.49
NECAP1-206ENST00000542095 CARD6Q9BX69 1037 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 GLIS2Q9BZE0 524 aaPredicted RBP12□□□□□ -0.49
NECAP1-206ENST00000542095 ZHX3Q9H4I2 956 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 EMILIN3Q9NT22 766 aa12□□□□□ -0.49
NECAP1-206ENST00000542095 EFCAB8A8MWE9 144 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 MEIS1O00470 390 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 RPS12P25398 132 aaKnown RBP11.99□□□□□ -0.49
NECAP1-206ENST00000542095 PSMC6P62333 389 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 CDK17Q00537 523 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 RAD51AP2Q09MP3 1159 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 GIT2Q14161 759 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 RASA3Q14644 834 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 CCDC40Q4G0X9 1142 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
NECAP1-206ENST00000542095 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 CCDC170Q8IYT3 715 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 ZNF341Q9BYN7 854 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 SIK3Q9Y2K2 1263 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 NKRFO15226 690 aaKnown RBP eCLIP11.99□□□□□ -0.49
NECAP1-206ENST00000542095 TADA3O75528 432 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 ZBTB7AO95365 584 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 EYA4O95677 639 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 ZNF280AP59817 542 aaPredicted RBP11.99□□□□□ -0.49
NECAP1-206ENST00000542095 KRT83P78385 493 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 TUBB2AQ13885 445 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 LRCH2Q5VUJ6 765 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 NELFCDQ8IXH7 590 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 SCFD1Q8WVM8 642 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 SLC5A5Q92911 643 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 TUBB2BQ9BVA1 445 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 FGFBP2Q9BYJ0 223 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 TUFT1Q9NNX1 390 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 FBXO28Q9NVF7 368 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 RABGAP1Q9Y3P9 1069 aa11.99□□□□□ -0.49
NECAP1-206ENST00000542095 MYH11P35749 1972 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 SHTN1A0MZ66 631 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 CTAGE9A4FU28 777 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 PHF20L1A8MW92 1017 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 EML1O00423 815 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 IPO7O95373 1038 aaKnown RBP11.98□□□□□ -0.49
NECAP1-206ENST00000542095 ARHGAP25P42331 645 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 PTGER2P43116 358 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 SETQ01105 290 aaPredicted RBP11.98□□□□□ -0.49
NECAP1-206ENST00000542095 CYP4A11Q02928 519 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 PPP2R3AQ06190 1150 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 PPP2R5CQ13362 524 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 OTOP1Q7RTM1 612 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 LPAR1Q92633 364 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 REEP2Q9BRK0 252 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms