RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 A0A087X0B3 334 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 WDR46O15213 610 aaKnown RBP8.77□□□□□ -1
AC005840.3-201ENST00000541888 FOXN1O15353 648 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 CELF2O95319 508 aaKnown RBP8.77□□□□□ -1
AC005840.3-201ENST00000541888 YEATS4O95619 227 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 PDIA4P13667 645 aaKnown RBP8.77□□□□□ -1
AC005840.3-201ENST00000541888 PFKFB1P16118 471 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 SMARCA1P28370 1054 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 IREB2P48200 963 aaKnown RBP8.77□□□□□ -1
AC005840.3-201ENST00000541888 SNW1Q13573 536 aaKnown RBP8.77□□□□□ -1
AC005840.3-201ENST00000541888 ZRSR1Q15695 479 aaKnown RBP8.77□□□□□ -1
AC005840.3-201ENST00000541888 HS1BP3Q53T59 392 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 MRPL14Q6P1L8 145 aaKnown RBP8.77□□□□□ -1
AC005840.3-201ENST00000541888 PNMA8AQ86V59 439 aaPredicted RBP8.77□□□□□ -1
AC005840.3-201ENST00000541888 GRAMD1CQ8IYS0 662 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 ADAM32Q8TC27 787 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 CUL5Q93034 780 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 PPP1R9BQ96SB3 815 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 PLIN2Q99541 437 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 RANBP17Q9H2T7 1088 aaKnown RBP8.77□□□□□ -1
AC005840.3-201ENST00000541888 RIC8AQ9NPQ8 531 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 DOCK5Q9H7D0 1870 aa8.77□□□□□ -1
AC005840.3-201ENST00000541888 MBD3O95983 291 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 CASP1P29466 404 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 GNA11P29992 359 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 NF2P35240 595 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 NONOQ15233 471 aaKnown RBP eCLIP8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 CST9Q5W186 159 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 ISM2Q6H9L7 571 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 DAGLBQ8NCG7 672 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 CYP2W1Q8TAV3 490 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 KCNG4Q8TDN1 519 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 CHURC1Q8WUH1 139 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 STAMQ92783 540 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 WDR18Q9BV38 432 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 AS3MTQ9HBK9 375 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 COL20A1Q9P218 1284 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 FEM1BQ9UK73 627 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 LOC285556D6RIA3 1793 aa8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 RBBP6Q7Z6E9 1792 aaKnown RBP8.77□□□□□ -1.01
AC005840.3-201ENST00000541888 LCTP09848 1927 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 VWA5AO00534 786 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 OFD1O75665 1012 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 GRM1Q13255 1194 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 NOL9Q5SY16 702 aaKnown RBP8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 ADALQ6DHV7 355 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 ZSCAN30Q86W11 494 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 CCDC116Q8IYX3 515 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 ANKRD13AQ8IZ07 590 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 PRPF38AQ8NAV1 312 aaKnown RBP8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 RNF214Q8ND24 703 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 CCDC12Q8WUD4 166 aaPredicted RBP8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 MRPS27Q92552 414 aaKnown RBP8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 SLC10A4Q96EP9 437 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 KCTD15Q96SI1 283 aaPredicted RBP8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 PAGR1Q9BTK6 254 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 TMOD4Q9NZQ9 345 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 PPP1R9AQ9ULJ8 1098 aa8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 NOL7Q9UMY1 257 aaKnown RBP8.76□□□□□ -1.01
AC005840.3-201ENST00000541888 TMEM132BQ14DG7 1078 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 NSMFQ6X4W1 530 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 NEK8Q86SG6 692 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 C4orf32Q8N8J7 132 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 BANK1Q8NDB2 785 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 ENGASEQ8NFI3 743 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 LPAR1Q92633 364 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 ANO3Q9BYT9 981 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 SLC38A10Q9HBR0 1119 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 CDV3Q9UKY7 258 aaKnown RBP8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 TRPM7Q96QT4 1865 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 ESYT2A0FGR8 921 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 BIN1O00499 593 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 CYP2C8P10632 490 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 TECP42680 631 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 TXKP42681 527 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 USP14P54578 494 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 ATP2C1P98194 919 aaPredicted RBP8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 CCDC183Q5T5S1 534 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 SNRNP48Q6IEG0 339 aaKnown RBP8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 TREML4Q6UXN2 200 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 CCDC73Q6ZRK6 1079 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 KRT25Q7Z3Z0 450 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 FAM160B2Q86V87 743 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 FMR1NBQ8N0W7 255 aaPredicted RBP8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 IL31RAQ8NI17 732 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 CLEC4DQ8WXI8 215 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 ANP32BQ92688 251 aaKnown RBP8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 NUP62CLQ9H1M0 184 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 TNMDQ9H2S6 317 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 BTBD7Q9P203 1132 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 ABCB11O95342 1321 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 KIAA1217Q5T5P2 1943 aa8.75□□□□□ -1.01
AC005840.3-201ENST00000541888 MCM3APO60318 1980 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 FAM86B1E9PN63 330 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 POLR2DO15514 142 aaKnown RBP8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 SORBS3O60504 671 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 NEMFO60524 1076 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 PPP6R2O75170 966 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 ZNF202O95125 648 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 ICAM1P05362 532 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms