RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 DCPSQ96C86 337 aaKnown RBP16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 TUBB2BQ9BVA1 445 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 MRFAP1Q9Y605 127 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 PRCPP42785 496 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 EHHADHQ08426 723 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 MTMR2Q13614 643 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 CCDC174Q6PII3 467 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 RAD9BQ6WBX8 426 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 TMTC1Q8IUR5 882 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 STAMQ92783 540 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 RPAP3Q9H6T3 665 aaPredicted RBP16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 RNF181Q9P0P0 153 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 AFG3L2Q9Y4W6 797 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 MEIS1O00470 390 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 CDC25AP30304 524 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 DSG3P32926 999 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 ZNF76P36508 570 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 LRRN4CLQ8ND94 238 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 WDR24Q96S15 920 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 VAV3Q9UKW4 847 aa16.32■□□□□ 0.2
SPOCK3-226ENST00000541354 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 MSH4O15457 936 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 KIF20AO95235 890 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 EEF1GP26641 437 aaKnown RBP16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 CCT6AP40227 531 aaKnown RBP16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 PRR16Q569H4 304 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 PCNX4Q63HM2 1172 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 IRF2BP1Q8IU81 584 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 CTDP1Q9Y5B0 961 aaPredicted RBP16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 OTOFQ9HC10 1997 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 KCNJ18B7U540 433 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 FAM86B1E9PN63 330 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 CFBP00751 764 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 FAM86B2P0C5J1 330 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 SNAP25P60880 206 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 GNG11P61952 73 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 KCNJ12Q14500 433 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 FAM114A1Q8IWE2 563 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 REPS2Q8NFH8 660 aa16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 V9GYY5 206 aaPredicted RBP16.31■□□□□ 0.2
SPOCK3-226ENST00000541354 POTEMA6NI47 508 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 VWA5AO00534 786 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 USP2O75604 605 aaPredicted RBP16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 FLOT1O75955 427 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 CASP14P31944 242 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 DMTNQ08495 405 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 SPP2Q13103 211 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 CATSPERGQ6ZRH7 1159 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 GUF1Q8N442 669 aaKnown RBP16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 LRRC15Q8TF66 581 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 TANGO6Q9C0B7 1094 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 MRPL44Q9H9J2 332 aaKnown RBP16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 FBXO28Q9NVF7 368 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 HOXC10Q9NYD6 342 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 SOWAHDA6NJG2 315 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 N4BP3O15049 544 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 PSMD10O75832 226 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 FGFR1OPO95684 399 aaKnown RBP16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 CCNE1P24864 410 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 ASIC1P78348 528 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 COG2Q14746 738 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 ZYXQ15942 572 aaKnown RBP16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 B3GNT9Q6UX72 402 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 RSRC2Q7L4I2 434 aaKnown RBP16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 SULF1Q8IWU6 871 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 UBXN4Q92575 508 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 MXRA8Q9BRK3 442 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 KCND2Q9NZV8 630 aa16.3■□□□□ 0.2
SPOCK3-226ENST00000541354 FRMD3A2A2Y4 597 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 ATP8B1O43520 1251 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 PPP1R12BO60237 982 aaPredicted RBP16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 STAM2O75886 525 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 IREB2P48200 963 aaKnown RBP16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 GABPB1Q06547 395 aaPredicted RBP16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 MB21D1Q8N884 522 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 ZNF507Q8TCN5 953 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 ARID3AQ99856 593 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 ZNF446Q9NWS9 450 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 GDAQ9Y2T3 454 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 PTPRFP10586 1907 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 PDE4DQ08499 809 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 MTF1Q14872 753 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 MNS1Q8NEH6 495 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 IQCDQ96DY2 449 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 ZMYND15Q9H091 742 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 ABHD10Q9NUJ1 306 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 MYO1AQ9UBC5 1043 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
SPOCK3-226ENST00000541354 MYMKA6NI61 221 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 MAFGO15525 162 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 HOXA13P31271 388 aaPredicted RBP16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 ARHGAP29Q52LW3 1261 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms