RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 FEZ2Q9UHY8 353 aaPredicted RBP19.07■□□□□ 0.64
SPIDR-227ENST00000541342 ATP1A1P05023 1023 aaKnown RBP19.07■□□□□ 0.64
SPIDR-227ENST00000541342 MMP14P50281 582 aa19.07■□□□□ 0.64
SPIDR-227ENST00000541342 RASSF10A6NK89 507 aa19.07■□□□□ 0.64
SPIDR-227ENST00000541342 OR8K1Q8NGG5 319 aa19.07■□□□□ 0.64
SPIDR-227ENST00000541342 POTEMA6NI47 508 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 ACTN2P35609 894 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 CRYGNQ8WXF5 182 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 TTYH3Q9C0H2 523 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 RCCD1A6NED2 376 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 SRGAP2O75044 1071 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 ANKRD20A12PQ8NF67 263 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 MMS19Q96T76 1030 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 HACL1Q9UJ83 578 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 CAPN11Q9UMQ6 739 aa19.06■□□□□ 0.64
SPIDR-227ENST00000541342 A0A1W2PQC6 194 aa19.05■□□□□ 0.64
SPIDR-227ENST00000541342 LRWD1Q9UFC0 647 aa19.05■□□□□ 0.64
SPIDR-227ENST00000541342 ASNSP08243 561 aa19.05■□□□□ 0.64
SPIDR-227ENST00000541342 SLC20A2Q08357 652 aa19.05■□□□□ 0.64
SPIDR-227ENST00000541342 GRB10Q13322 594 aa19.05■□□□□ 0.64
SPIDR-227ENST00000541342 TNFAIP1Q13829 316 aa19.05■□□□□ 0.64
SPIDR-227ENST00000541342 MEA1Q16626 185 aa19.05■□□□□ 0.64
SPIDR-227ENST00000541342 NUDT12Q9BQG2 462 aa19.05■□□□□ 0.64
SPIDR-227ENST00000541342 AGPAT5Q9NUQ2 364 aa19.05■□□□□ 0.64
SPIDR-227ENST00000541342 ZC3H4Q9UPT8 1303 aaKnown RBP19.04■□□□□ 0.64
SPIDR-227ENST00000541342 NKRFO15226 690 aaKnown RBP eCLIP19.04■□□□□ 0.64
SPIDR-227ENST00000541342 GCFC2P16383 781 aaKnown RBP19.04■□□□□ 0.64
SPIDR-227ENST00000541342 AP3B2Q13367 1082 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 TTI2Q6NXR4 508 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 PNMA5Q96PV4 448 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 HAUS4Q9H6D7 363 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 RNF216Q9NWF9 866 aaPredicted RBP19.04■□□□□ 0.64
SPIDR-227ENST00000541342 LUC7L2Q9Y383 392 aaKnown RBP19.04■□□□□ 0.64
SPIDR-227ENST00000541342 EIF3JO75822 258 aaKnown RBP19.04■□□□□ 0.64
SPIDR-227ENST00000541342 KLK7P49862 253 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 USP14P54578 494 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 PAPD7Q5XG87 772 aaKnown RBP19.04■□□□□ 0.64
SPIDR-227ENST00000541342 FOXR1Q6PIV2 292 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 EEF2KMTQ96G04 330 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 UIMC1Q96RL1 719 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 LACRTQ9GZZ8 138 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 CUEDC2Q9H467 287 aa19.04■□□□□ 0.64
SPIDR-227ENST00000541342 PHACTR2O75167 634 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 EEF1GP26641 437 aaKnown RBP19.03■□□□□ 0.64
SPIDR-227ENST00000541342 USP11P51784 963 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 PDIA5Q14554 519 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 TMEM266Q2M3C6 531 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 DUSP9Q99956 384 aaKnown RBP19.03■□□□□ 0.64
SPIDR-227ENST00000541342 RANBP17Q9H2T7 1088 aaKnown RBP19.03■□□□□ 0.64
SPIDR-227ENST00000541342 FBXO28Q9NVF7 368 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 HOXA13P31271 388 aaPredicted RBP19.03■□□□□ 0.64
SPIDR-227ENST00000541342 KCNB1Q14721 858 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 GIMAP8Q8ND71 665 aaPredicted RBP19.03■□□□□ 0.64
SPIDR-227ENST00000541342 THAP9Q9H5L6 903 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 CYP3A7-CYP3A51PA0A087WV96 503 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 B4DLN1 442 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 CYP3A7P24462 503 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 CCDC174Q6PII3 467 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 MBOAT7Q96N66 472 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 ZNF341Q9BYN7 854 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 DEFB129Q9H1M3 183 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 BLOC1S4Q9NUP1 217 aa19.03■□□□□ 0.64
SPIDR-227ENST00000541342 RHOBTB3O94955 611 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 ARHGAP4P98171 946 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 CCDC122Q5T0U0 273 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 FAM71BQ8TC56 605 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 GBP3Q9H0R5 595 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 SH2D4AQ9H788 454 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 MAGEF1Q9HAY2 307 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 SYF2O95926 243 aaKnown RBP19.02■□□□□ 0.64
SPIDR-227ENST00000541342 MYL1P05976 194 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 CALML4Q96GE6 196 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 KCNMB3Q9NPA1 279 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 DUSP10Q9Y6W6 482 aa19.02■□□□□ 0.64
SPIDR-227ENST00000541342 DICER1Q9UPY3 1922 aaKnown RBP19.02■□□□□ 0.64
SPIDR-227ENST00000541342 TRIM66O15016 1216 aa19.02■□□□□ 0.63
SPIDR-227ENST00000541342 ECM1Q16610 540 aa19.02■□□□□ 0.63
SPIDR-227ENST00000541342 ZNF662Q6ZS27 426 aa19.02■□□□□ 0.63
SPIDR-227ENST00000541342 CCDC102AQ96A19 550 aa19.02■□□□□ 0.63
SPIDR-227ENST00000541342 TRIM9Q9C026 710 aa19.02■□□□□ 0.63
SPIDR-227ENST00000541342 SAR1BQ9Y6B6 198 aa19.02■□□□□ 0.63
SPIDR-227ENST00000541342 PLA2G6O60733 806 aa19.01■□□□□ 0.63
SPIDR-227ENST00000541342 TUBBP07437 444 aa19.01■□□□□ 0.63
SPIDR-227ENST00000541342 DGKZQ13574 1117 aa19.01■□□□□ 0.63
SPIDR-227ENST00000541342 NBPF12Q5TAG4 269 aaPredicted RBP19.01■□□□□ 0.63
SPIDR-227ENST00000541342 CHURC1Q8WUH1 139 aa19.01■□□□□ 0.63
SPIDR-227ENST00000541342 TBC1D5Q92609 795 aa19.01■□□□□ 0.63
SPIDR-227ENST00000541342 PDE2AO00408 941 aaPredicted RBP19.01■□□□□ 0.63
SPIDR-227ENST00000541342 RPS6KA5O75582 802 aa19.01■□□□□ 0.63
SPIDR-227ENST00000541342 TRIM47Q96LD4 638 aa19.01■□□□□ 0.63
SPIDR-227ENST00000541342 NAP1L4Q99733 375 aaKnown RBP19.01■□□□□ 0.63
SPIDR-227ENST00000541342 RAB34Q9BZG1 259 aa19.01■□□□□ 0.63
SPIDR-227ENST00000541342 PIK3CDO00329 1044 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 PES1O00541 588 aaKnown RBP19■□□□□ 0.63
SPIDR-227ENST00000541342 SREBF1P36956 1147 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 AARSP49588 968 aaKnown RBP eCLIP19■□□□□ 0.63
SPIDR-227ENST00000541342 SNX29Q8TEQ0 813 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 C7orf25Q9BPX7 421 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 PCDHA12Q9UN75 941 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 SPDYE3A6NKU9 549 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms