RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 NOL7Q9UMY1 257 aaKnown RBP21.3■■□□□ 1
VPS33A-205ENST00000541169 IPO5O00410 1097 aaKnown RBP21.29■■□□□ 1
VPS33A-205ENST00000541169 TBX3O15119 743 aa21.29■■□□□ 1
VPS33A-205ENST00000541169 DTNBO60941 627 aa21.29■■□□□ 1
VPS33A-205ENST00000541169 AFG1LQ8WV93 481 aa21.29■■□□□ 1
VPS33A-205ENST00000541169 ZFP91Q96JP5 570 aaPredicted RBP21.29■■□□□ 1
VPS33A-205ENST00000541169 FAM20AQ96MK3 541 aa21.29■■□□□ 1
VPS33A-205ENST00000541169 ZNF577Q9BSK1 485 aa21.29■■□□□ 1
VPS33A-205ENST00000541169 KATNAL1Q9BW62 490 aa21.29■■□□□ 1
VPS33A-205ENST00000541169 JPH1Q9HDC5 661 aaPredicted RBP21.29■■□□□ 1
VPS33A-205ENST00000541169 MMP3P08254 477 aa21.28■■□□□ 1
VPS33A-205ENST00000541169 FOSBP53539 338 aa21.28■■□□□ 1
VPS33A-205ENST00000541169 GUCY1B3Q02153 619 aa21.28■■□□□ 1
VPS33A-205ENST00000541169 LETM2Q2VYF4 491 aa21.28■■□□□ 1
VPS33A-205ENST00000541169 CYFIP1Q7L576 1253 aa21.28■■□□□ 1
VPS33A-205ENST00000541169 CYP2W1Q8TAV3 490 aa21.28■■□□□ 1
VPS33A-205ENST00000541169 COPS5Q92905 334 aa21.28■■□□□ 1
VPS33A-205ENST00000541169 MTG1Q9BT17 334 aaPredicted RBP21.28■■□□□ 1
VPS33A-205ENST00000541169 SENP6Q9GZR1 1112 aaPredicted RBP21.28■■□□□ 1
VPS33A-205ENST00000541169 STARD7Q9NQZ5 370 aa21.28■■□□□ 1
VPS33A-205ENST00000541169 DDX25Q9UHL0 483 aaKnown RBP21.28■■□□□ 1
VPS33A-205ENST00000541169 MROH7Q68CQ1 1323 aa21.28■■□□□ 1
VPS33A-205ENST00000541169 A0A1W2PQ45 241 aaPredicted RBP21.27■■□□□ 1
VPS33A-205ENST00000541169 A0A1W2PQY0 241 aa21.27■■□□□ 1
VPS33A-205ENST00000541169 CCNT1O60563 726 aaKnown RBP21.27■■□□□ 1
VPS33A-205ENST00000541169 CAPN15O75808 1086 aa21.27■■□□□ 1
VPS33A-205ENST00000541169 ARP10275 920 aa21.27■■□□□ 1
VPS33A-205ENST00000541169 PURAQ00577 322 aaKnown RBP21.27■■□□□ 1
VPS33A-205ENST00000541169 BEX3Q00994 111 aa21.27■■□□□ 1
VPS33A-205ENST00000541169 KRT76Q01546 638 aa21.27■■□□□ 1
VPS33A-205ENST00000541169 SLFN12Q8IYM2 578 aa21.27■■□□□ 1
VPS33A-205ENST00000541169 SEPT1Q8WYJ6 367 aa21.27■■□□□ 1
VPS33A-205ENST00000541169 LENG9Q96B70 501 aa21.27■■□□□ 1
VPS33A-205ENST00000541169 SLC9A2Q9UBY0 812 aa21.27■■□□□ 1
VPS33A-205ENST00000541169 A0A0U1RQG5 324 aaPredicted RBP21.26■□□□□ 0.99
VPS33A-205ENST00000541169 MYADML2A6NDP7 307 aa21.26■□□□□ 0.99
VPS33A-205ENST00000541169 ATP9AO75110 1047 aa21.26■□□□□ 0.99
VPS33A-205ENST00000541169 BAG4O95429 457 aaKnown RBP21.26■□□□□ 0.99
VPS33A-205ENST00000541169 HSDL1Q3SXM5 330 aa21.26■□□□□ 0.99
VPS33A-205ENST00000541169 TMEM63BQ5T3F8 832 aa21.26■□□□□ 0.99
VPS33A-205ENST00000541169 BRAPQ7Z569 592 aa21.26■□□□□ 0.99
VPS33A-205ENST00000541169 SMAP1Q8IYB5 467 aaPredicted RBP21.26■□□□□ 0.99
VPS33A-205ENST00000541169 DIS3LQ8TF46 1054 aaKnown RBP21.26■□□□□ 0.99
VPS33A-205ENST00000541169 TNPO1Q92973 898 aaKnown RBP21.26■□□□□ 0.99
VPS33A-205ENST00000541169 SNX17Q15036 470 aa21.25■□□□□ 0.99
VPS33A-205ENST00000541169 RILPL1Q5EBL4 403 aa21.25■□□□□ 0.99
VPS33A-205ENST00000541169 MCTP1Q6DN14 999 aa21.25■□□□□ 0.99
VPS33A-205ENST00000541169 ZNF746Q6NUN9 644 aaPredicted RBP21.25■□□□□ 0.99
VPS33A-205ENST00000541169 SLC5A5Q92911 643 aa21.25■□□□□ 0.99
VPS33A-205ENST00000541169 VTI1AQ96AJ9 217 aa21.25■□□□□ 0.99
VPS33A-205ENST00000541169 GPR20Q99678 358 aa21.25■□□□□ 0.99
VPS33A-205ENST00000541169 ZNF215Q9UL58 517 aaPredicted RBP21.25■□□□□ 0.99
VPS33A-205ENST00000541169 MSH4O15457 936 aa21.24■□□□□ 0.99
VPS33A-205ENST00000541169 TDP2O95551 362 aa21.24■□□□□ 0.99
VPS33A-205ENST00000541169 MYL3P08590 195 aa21.24■□□□□ 0.99
VPS33A-205ENST00000541169 SFNP31947 248 aa21.24■□□□□ 0.99
VPS33A-205ENST00000541169 MLLT1Q03111 559 aaPredicted RBP21.24■□□□□ 0.99
VPS33A-205ENST00000541169 PTPN11Q06124 597 aaPredicted RBP21.24■□□□□ 0.99
VPS33A-205ENST00000541169 CXCL17Q6UXB2 119 aa21.24■□□□□ 0.99
VPS33A-205ENST00000541169 SLC39A5Q6ZMH5 540 aa21.24■□□□□ 0.99
VPS33A-205ENST00000541169 RDM1Q8NG50 284 aa21.24■□□□□ 0.99
VPS33A-205ENST00000541169 EDIL3O43854 480 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 MARCH6O60337 910 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 GAS7O60861 476 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 SYT1P21579 422 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 SLC26A2P50443 739 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 ITGB3BPQ13352 177 aaPredicted RBP21.23■□□□□ 0.99
VPS33A-205ENST00000541169 EARS2Q5JPH6 523 aaKnown RBP21.23■□□□□ 0.99
VPS33A-205ENST00000541169 LRCH2Q5VUJ6 765 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 NFRKBQ6P4R8 1299 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 TOX2Q96NM4 488 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 TEKT3Q9BXF9 490 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 AZI2Q9H6S1 392 aa21.23■□□□□ 0.99
VPS33A-205ENST00000541169 DHX15O43143 795 aaKnown RBP21.22■□□□□ 0.99
VPS33A-205ENST00000541169 NEMFO60524 1076 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 ATG7O95352 703 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 F2P00734 622 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 JAK3P52333 1124 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 ITGA7Q13683 1181 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 ETNPPLQ8TBG4 499 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 FERMT2Q96AC1 680 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 SMARCAD1Q9H4L7 1026 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 ZSCAN16Q9H4T2 348 aaPredicted RBP21.22■□□□□ 0.99
VPS33A-205ENST00000541169 KCNMB3Q9NPA1 279 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 EMSYQ7Z589 1322 aa21.22■□□□□ 0.99
VPS33A-205ENST00000541169 ARVCFO00192 962 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 LAD1O00515 517 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 STX6O43752 255 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 TCF7P36402 384 aaPredicted RBP21.21■□□□□ 0.99
VPS33A-205ENST00000541169 ACTR2P61160 394 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 MIS18BP1Q6P0N0 1132 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 ANKRD33Q7Z3H0 272 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 SLC43A3Q8NBI5 491 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 PKD2L1Q9P0L9 805 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 PCDHA10Q9Y5I2 948 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 NR2E3Q9Y5X4 410 aa21.21■□□□□ 0.99
VPS33A-205ENST00000541169 BRCA2P51587 3418 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 VPS37CA5D8V6 355 aaPredicted RBP21.2■□□□□ 0.98
VPS33A-205ENST00000541169 DCDC2CA8MYV0 355 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 WDR64B1ANS9 1081 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms