RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 MYL1P05976 194 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 ITGB5P18084 799 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 PLCG1P19174 1290 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 EIF2AK2P19525 551 aaKnown RBP16■□□□□ 0.15
CYB561A3-216ENST00000540755 CTGFP29279 349 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 LACTBP83111 547 aaPredicted RBP16■□□□□ 0.15
CYB561A3-216ENST00000540755 UVSSAQ2YD98 709 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 GRAMD1CQ8IYS0 662 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 TRIML1Q8N9V2 468 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 RNF214Q8ND24 703 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 NSUN6Q8TEA1 469 aaKnown RBP16■□□□□ 0.15
CYB561A3-216ENST00000540755 SMARCE1Q969G3 411 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 ZNF333Q96JL9 665 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 PAGR1Q9BTK6 254 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 JADE2Q9NQC1 790 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 RBPJLQ9UBG7 517 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 STK17AQ9UEE5 414 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 VAV3Q9UKW4 847 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 SMC2O95347 1197 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 AFMP43652 599 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 MRPS9P82933 396 aaKnown RBP15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 DPYDQ12882 1025 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 GRB10Q13322 594 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 TMEM119Q4V9L6 283 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 HAUS3Q68CZ6 603 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 C17orf99Q6UX52 265 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 DNERQ8NFT8 737 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 ERMNQ8TAM6 284 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 CDK5RAP3Q96JB5 506 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 PNMA5Q96PV4 448 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 MOV10L1Q9BXT6 1211 aaKnown RBP15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 NT5C3AQ9H0P0 336 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 DNAJC25Q9H1X3 360 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 TXNRD2Q9NNW7 524 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 KBTBD4Q9NVX7 518 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 KIAA1217Q5T5P2 1943 aa15.99■□□□□ 0.15
CYB561A3-216ENST00000540755 PDHXO00330 501 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 PSMD10O75832 226 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 ARP10275 920 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 ERCC3P19447 782 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 CCND2P30279 289 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 PPP2R5CQ13362 524 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 VSIG10LQ86VR7 867 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 NCAPG2Q86XI2 1143 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 ANKRD35Q8N283 1001 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 SHCBP1Q8NEM2 672 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 MTRQ99707 1265 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 NUDT12Q9BQG2 462 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 ZNF577Q9BSK1 485 aa15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 ZNFX1Q9P2E3 1918 aaKnown RBP15.98■□□□□ 0.15
CYB561A3-216ENST00000540755 PEX10O60683 326 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 STAM2O75886 525 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 NR3C2P08235 984 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 ZNF165P49910 485 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 ERVK-9P63128 1117 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 ERVK-24P63145 666 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 LRCH2Q5VUJ6 765 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 C11orf57Q6ZUT1 292 aaPredicted RBP15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 LRRC15Q8TF66 581 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 GSDMAQ96QA5 445 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 PURBQ96QR8 312 aaKnown RBP15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 PLIN2Q99541 437 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 RIT2Q99578 217 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 BPIFA3Q9BQP9 254 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 WDR11Q9BZH6 1224 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 NAT10Q9H0A0 1025 aaKnown RBP15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 CBX8Q9HC52 389 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 CPA4Q9UI42 421 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 MAN1B1Q9UKM7 699 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 CEP290O15078 2479 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 LOXHD1Q8IVV2 1947 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 LRRC37A2A6NM11 1700 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 IPO5O00410 1097 aaKnown RBP15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 BIN1O00499 593 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 GAS7O60861 476 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 CYP2C8P10632 490 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 MYCLP12524 364 aaPredicted RBP15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 EN2P19622 333 aaPredicted RBP15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 CCT6AP40227 531 aaKnown RBP15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 MORC3Q14149 939 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 Q3C1V9 767 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 DPCR1Q3MIW9 517 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 SLC9C1Q4G0N8 1177 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 NCAPH2Q6IBW4 605 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 KCTD17Q8N5Z5 321 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 SMCR8Q8TEV9 937 aaPredicted RBP15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 GPRASP2Q96D09 838 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 UIMC1Q96RL1 719 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 IWS1Q96ST2 819 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 TEKT3Q9BXF9 490 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 MROH8Q9H579 483 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 AGO4Q9HCK5 861 aaKnown RBP15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 KCNH7Q9NS40 1196 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 BLOC1S4Q9NUP1 217 aa15.97■□□□□ 0.15
CYB561A3-216ENST00000540755 A0A087WWV3 80 aa15.96■□□□□ 0.14
CYB561A3-216ENST00000540755 MAFGO15525 162 aa15.96■□□□□ 0.14
CYB561A3-216ENST00000540755 RPA1P27694 616 aa15.96■□□□□ 0.14
CYB561A3-216ENST00000540755 GCLCP48506 637 aaPredicted RBP15.96■□□□□ 0.14
CYB561A3-216ENST00000540755 AMPD3Q01432 767 aa15.96■□□□□ 0.14
CYB561A3-216ENST00000540755 SEMA3FQ13275 785 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms