RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 SFR1Q86XK3 245 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 MYCT1Q8N699 235 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 GPR161Q8N6U8 529 aaKnown RBP18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 NOA1Q8NC60 698 aaKnown RBP18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 ITIH6Q6UXX5 1313 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 LAMB2P55268 1798 aa18.89■□□□□ 0.62
EPB41L3-204ENST00000540638 FKBP3Q00688 224 aaKnown RBP18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 NUP58Q9BVL2 599 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 PRR12Q9ULL5 1215 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 FAM13AO94988 1023 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 GFPT1Q06210 699 aaPredicted RBP18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 WDR59Q6PJI9 974 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 SECISBP2LQ93073 1101 aaKnown RBP18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 IKZF4Q9H2S9 585 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 SMARCAL1Q9NZC9 954 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 SAR1BQ9Y6B6 198 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 GJA3Q9Y6H8 435 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 PSMD14O00487 310 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 NOP2P46087 812 aaKnown RBP18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 KCTD19Q17RG1 926 aaPredicted RBP18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 HAUS4Q9H6D7 363 aa18.89■□□□□ 0.61
EPB41L3-204ENST00000540638 FAM86B1E9PN63 330 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 CETN3O15182 167 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 FAM86B2P0C5J1 330 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 PPARDQ03181 441 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 PDIA5Q14554 519 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 CATSPER3Q86XQ3 398 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 SMAP1Q8IYB5 467 aaPredicted RBP18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 COL4A3BPQ9Y5P4 624 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 RCCD1A6NED2 376 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 SMARCA1P28370 1054 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 NT5C2P49902 561 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 GUF1Q8N442 669 aaKnown RBP18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 GLIS2Q9BZE0 524 aaPredicted RBP18.88■□□□□ 0.61
EPB41L3-204ENST00000540638 SNHG28P0DPA3 235 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 GCFC2P16383 781 aaKnown RBP18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 KIF11P52732 1056 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 HERVK_113P62684 666 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 DGKZQ13574 1117 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 RRP1BQ14684 758 aaKnown RBP18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 GSPT2Q8IYD1 628 aaKnown RBP18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 SYCP3Q8IZU3 236 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 FAM133AQ8N9E0 248 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 REXO2Q9Y3B8 237 aaKnown RBP18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 KDM3AQ9Y4C1 1321 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 PVALEFA0A1B0GWK0 134 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 ERLIN1O75477 346 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 LRCH2Q5VUJ6 765 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 DCAF4Q8WV16 495 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 NYAP2Q9P242 653 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 TMCO5BA8MYB1 307 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 NCK2O43639 380 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 GAS7O60861 476 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 ACTN1P12814 892 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 ALAS1P13196 640 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 ZSCAN20P17040 1043 aaPredicted RBP18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 ARHGAP25P42331 645 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 PPP4R3AQ6IN85 833 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 ZNF507Q8TCN5 953 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 RABGGTAQ92696 567 aa18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 ATF5Q9Y2D1 282 aaPredicted RBP18.87■□□□□ 0.61
EPB41L3-204ENST00000540638 IGKV6D-41A0A0C4DH26 115 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 YDJCA8MPS7 323 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 MEIS2O14770 477 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 MYCLP12524 364 aaPredicted RBP18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 CYP2J2P51589 502 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 PRAMEF18Q5VWM3 479 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 CENPPQ6IPU0 288 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 A0A1W2PQC6 194 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 EDIL3O43854 480 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 TACC1O75410 805 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 CASP5P51878 434 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 LONRF2Q1L5Z9 754 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 MIIPQ5JXC2 388 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 SLFN12Q8IYM2 578 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 TTLL6Q8N841 843 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 AKT1S1Q96B36 256 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 RABGAP1Q9Y3P9 1069 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 CASZ1Q86V15 1759 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 MYH8P13535 1937 aa18.86■□□□□ 0.61
EPB41L3-204ENST00000540638 ZBTB7AO95365 584 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 H2AFXP16104 143 aaPredicted RBP18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 OAS2P29728 719 aaKnown RBP18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 PPP1R2P41236 205 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 HSP90B2PQ58FF3 399 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 CC2D1AQ6P1N0 951 aaPredicted RBP18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 EHD2Q9NZN4 543 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 ADAMTS1Q9UHI8 967 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 KLRG2A4D1S0 409 aaPredicted RBP18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 CYP11B2P19099 503 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 NSMFQ6X4W1 530 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 PNKPQ96T60 521 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 P2RX7Q99572 595 aaKnown RBP18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 REEP2Q9BRK0 252 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 MYBP10242 640 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 USP8P40818 1118 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 C2orf54Q08AI8 447 aa18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 ZNF772Q68DY9 489 aaPredicted RBP18.85■□□□□ 0.61
EPB41L3-204ENST00000540638 SIAH1Q8IUQ4 282 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms