RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 RBM28Q9NW13 759 aaKnown RBP15.09■□□□□ 0.01
SEMA4D-223ENST00000540475 MICAL3Q7RTP6 2002 aa15.09■□□□□ 0.01
SEMA4D-223ENST00000540475 NBNO60934 754 aa15.08■□□□□ 0
SEMA4D-223ENST00000540475 LGALS2P05162 132 aa15.08■□□□□ 0
SEMA4D-223ENST00000540475 HMGB1P09429 215 aaKnown RBP15.08■□□□□ 0
SEMA4D-223ENST00000540475 RABGGTBP53611 331 aa15.08■□□□□ 0
SEMA4D-223ENST00000540475 CYFIP1Q7L576 1253 aa15.08■□□□□ 0
SEMA4D-223ENST00000540475 GIMAP8Q8ND71 665 aaPredicted RBP15.08■□□□□ 0
SEMA4D-223ENST00000540475 WNT8BQ93098 351 aa15.08■□□□□ 0
SEMA4D-223ENST00000540475 GPRASP2Q96D09 838 aa15.08■□□□□ 0
SEMA4D-223ENST00000540475 FAM217BQ9NTX9 383 aaPredicted RBP15.08■□□□□ 0
SEMA4D-223ENST00000540475 RTEL1Q9NZ71 1219 aa15.08■□□□□ 0
SEMA4D-223ENST00000540475 BRPF3Q9ULD4 1205 aa15.08■□□□□ 0
SEMA4D-223ENST00000540475 CNTNAP5Q8WYK1 1306 aa15.08■□□□□ 0
SEMA4D-223ENST00000540475 ZBBXA8MT70 800 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 MAFGO15525 162 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 KCNA2P16389 499 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 POU3F3P20264 500 aaPredicted RBP15.07■□□□□ 0
SEMA4D-223ENST00000540475 CHMP4BP1P59074 171 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 ADAM17P78536 824 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 ZNF200P98182 395 aaPredicted RBP15.07■□□□□ 0
SEMA4D-223ENST00000540475 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
SEMA4D-223ENST00000540475 ADGRE1Q14246 886 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 CNKSR3Q6P9H4 555 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 SYNE3Q6ZMZ3 975 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 NLRX1Q86UT6 975 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 MICU3Q86XE3 530 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 CDHR1Q96JP9 859 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 FTOQ9C0B1 505 aaKnown RBP eCLIP15.07■□□□□ 0
SEMA4D-223ENST00000540475 RNPEPQ9H4A4 650 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 PRDM12Q9H4Q4 367 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 UBIAD1Q9Y5Z9 338 aa15.07■□□□□ 0
SEMA4D-223ENST00000540475 ZBTB43O43298 467 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 ATP9AO75110 1047 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 MYOGP15173 224 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 ITGB5P18084 799 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 MBTPS1Q14703 1052 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 ZNF618Q5T7W0 954 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 PPP1R18Q6NYC8 613 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 HERC6Q8IVU3 1022 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 CCDC82Q8N4S0 544 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 USP38Q8NB14 1042 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 GAS2L1Q99501 681 aaPredicted RBP15.06■□□□□ 0
SEMA4D-223ENST00000540475 COL25A1Q9BXS0 654 aaPredicted RBP15.06■□□□□ 0
SEMA4D-223ENST00000540475 PCDHA6Q9UN73 950 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 TELO2Q9Y4R8 837 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 PCDHA8Q9Y5H6 950 aa15.06■□□□□ 0
SEMA4D-223ENST00000540475 ABHD14A-ACY1A0A1B0GW23 586 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 hCG_1642624A0A1W2PR95 340 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 C17orf102A2RUQ5 167 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 hCG_1984214I3L0E3 225 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 NOP56O00567 594 aaKnown RBP15.05■□□□□ -0
SEMA4D-223ENST00000540475 SORBS3O60504 671 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 EFCAB14O75071 495 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 CAND2O75155 1236 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 SMIM10L2AP0DMW4 78 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 SMIM10L2BP0DMW5 78 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 HSPA4P34932 840 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 WDR5P61964 334 aaKnown RBP15.05■□□□□ -0
SEMA4D-223ENST00000540475 RTN1Q16799 776 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 TCTN1Q2MV58 587 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 WWC2Q6AWC2 1192 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 TYW1BQ6NUM6 668 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 RAB11FIP4Q86YS3 637 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 ZNF713Q8N859 430 aaPredicted RBP15.05■□□□□ -0
SEMA4D-223ENST00000540475 AGXT2Q9BYV1 514 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 RIC8AQ9NPQ8 531 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 JADE2Q9NQC1 790 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 NID2Q14112 1375 aa15.05■□□□□ -0
SEMA4D-223ENST00000540475 EMSYQ7Z589 1322 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 GSTTP1A0A1W2PQM5 241 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 SPDYE3A6NKU9 549 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 TREHO43280 583 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 EPB41L2O43491 1005 aaKnown RBP15.04■□□□□ -0
SEMA4D-223ENST00000540475 CLK2P49760 499 aaKnown RBP15.04■□□□□ -0
SEMA4D-223ENST00000540475 UBE2SQ16763 222 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 PPP2R2DQ66LE6 453 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 HEATR3Q7Z4Q2 680 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 RPAINQ86UA6 219 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 ATP6V0A1Q93050 837 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 TCEANC2Q96MN5 208 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 BARHL2Q9NY43 387 aa15.04■□□□□ -0
SEMA4D-223ENST00000540475 SIP14410 1827 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 STXBP3O00186 592 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 LGR5O75473 907 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 FOSP01100 380 aaPredicted RBP15.03■□□□□ -0
SEMA4D-223ENST00000540475 CA3P07451 260 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 GNAT1P11488 350 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 CDC27P30260 824 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 TAP1Q03518 808 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 PLEKHG4Q58EX7 1191 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 FAM26DQ5JW98 314 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 CCDC136Q96JN2 1154 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 GLT8D2Q9H1C3 349 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 ZNF215Q9UL58 517 aaPredicted RBP15.03■□□□□ -0
SEMA4D-223ENST00000540475 SNX14Q9Y5W7 946 aa15.03■□□□□ -0
SEMA4D-223ENST00000540475 V9GY48 417 aaPredicted RBP15.03■□□□□ -0
SEMA4D-223ENST00000540475 WDR81Q562E7 1941 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 NRCAMQ92823 1304 aa15.02■□□□□ -0
SEMA4D-223ENST00000540475 KLF18A0A0U1RQI7 1052 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms