RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 DHCR24Q15392 516 aa9.21□□□□□ -0.94
TRAV11-201ENST00000539512 FIGNQ5HY92 759 aa9.21□□□□□ -0.94
TRAV11-201ENST00000539512 EMC4Q5J8M3 183 aa9.21□□□□□ -0.94
TRAV11-201ENST00000539512 RPTNQ6XPR3 784 aa9.21□□□□□ -0.94
TRAV11-201ENST00000539512 C11orf74Q86VG3 221 aa9.21□□□□□ -0.94
TRAV11-201ENST00000539512 UHMK1Q8TAS1 419 aaKnown RBP9.21□□□□□ -0.94
TRAV11-201ENST00000539512 DDX11Q96FC9 970 aa9.21□□□□□ -0.94
TRAV11-201ENST00000539512 ATP23Q9Y6H3 246 aa9.21□□□□□ -0.94
TRAV11-201ENST00000539512 PTPDC1A2A3K4 754 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 H7C1D1 291 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 SLC27A2O14975 620 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 NKRFO15226 690 aaKnown RBP eCLIP9.2□□□□□ -0.94
TRAV11-201ENST00000539512 PRR5P85299 388 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 ZNF174Q15697 407 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 PLEKHN1Q494U1 663 aaPredicted RBP9.2□□□□□ -0.94
TRAV11-201ENST00000539512 TTC1Q99614 292 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 BOCQ9BWV1 1114 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 CD244Q9BZW8 370 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 MTFR1LQ9H019 292 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 FAM53CQ9NYF3 392 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 B4GALT6Q9UBX8 382 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 SRPK3Q9UPE1 567 aa9.2□□□□□ -0.94
TRAV11-201ENST00000539512 ZNF561-AS1K7EIQ3 104 aa9.19□□□□□ -0.94
TRAV11-201ENST00000539512 PAPLNO95428 1278 aa9.19□□□□□ -0.94
TRAV11-201ENST00000539512 HABP4Q5JVS0 413 aaKnown RBP9.19□□□□□ -0.94
TRAV11-201ENST00000539512 TMC6Q7Z403 805 aa9.19□□□□□ -0.94
TRAV11-201ENST00000539512 ZNF605Q86T29 641 aa9.19□□□□□ -0.94
TRAV11-201ENST00000539512 ALG3Q92685 438 aa9.19□□□□□ -0.94
TRAV11-201ENST00000539512 PUS7Q96PZ0 661 aaKnown RBP9.19□□□□□ -0.94
TRAV11-201ENST00000539512 ORAI3Q9BRQ5 295 aa9.19□□□□□ -0.94
TRAV11-201ENST00000539512 EPB41L4BQ9H329 900 aa9.19□□□□□ -0.94
TRAV11-201ENST00000539512 PCIF1Q9H4Z3 704 aa9.19□□□□□ -0.94
TRAV11-201ENST00000539512 ZNF891A8MT65 544 aaPredicted RBP9.18□□□□□ -0.94
TRAV11-201ENST00000539512 SGSM2O43147 1006 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 BRINP1O60477 761 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 F2P00734 622 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 HMGB1P09429 215 aaKnown RBP9.18□□□□□ -0.94
TRAV11-201ENST00000539512 ITGB5P18084 799 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 GJA4P35212 333 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 IRF9Q00978 393 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 TUSC3Q13454 348 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 SEPT7Q16181 437 aaKnown RBP9.18□□□□□ -0.94
TRAV11-201ENST00000539512 TMEM132EQ6IEE7 984 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 KCTD1Q719H9 257 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.18□□□□□ -0.94
TRAV11-201ENST00000539512 PASD1Q8IV76 773 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 NXPE1Q8N323 547 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 TSPAN17Q96FV3 270 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 GPATCH3Q96I76 525 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 IFT22Q9H7X7 185 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 SMURF1Q9HCE7 757 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 SIRT5Q9NXA8 310 aa9.18□□□□□ -0.94
TRAV11-201ENST00000539512 SCDO00767 359 aa9.17□□□□□ -0.94
TRAV11-201ENST00000539512 KCNK3O14649 394 aa9.17□□□□□ -0.94
TRAV11-201ENST00000539512 TADA3O75528 432 aa9.17□□□□□ -0.94
TRAV11-201ENST00000539512 KPNA1P52294 538 aaPredicted RBP9.17□□□□□ -0.94
TRAV11-201ENST00000539512 HHIPL2Q6UWX4 724 aa9.17□□□□□ -0.94
TRAV11-201ENST00000539512 LIN37Q96GY3 246 aaPredicted RBP9.17□□□□□ -0.94
TRAV11-201ENST00000539512 DIRC2Q96SL1 478 aa9.17□□□□□ -0.94
TRAV11-201ENST00000539512 NSUN3Q9H649 340 aaKnown RBP9.17□□□□□ -0.94
TRAV11-201ENST00000539512 DCP1AQ9NPI6 582 aaPredicted RBP9.17□□□□□ -0.94
TRAV11-201ENST00000539512 RIC8BQ9NVN3 520 aa9.17□□□□□ -0.94
TRAV11-201ENST00000539512 THG1LQ9NWX6 298 aaKnown RBP9.17□□□□□ -0.94
TRAV11-201ENST00000539512 KLHL14Q9P2G3 628 aa9.17□□□□□ -0.94
TRAV11-201ENST00000539512 ASH2LQ9UBL3 628 aa9.17□□□□□ -0.94
TRAV11-201ENST00000539512 ATP8A1Q9Y2Q0 1164 aa9.17□□□□□ -0.94
TRAV11-201ENST00000539512 HRKO00198 91 aa9.16□□□□□ -0.94
TRAV11-201ENST00000539512 TRAF5O00463 557 aa9.16□□□□□ -0.94
TRAV11-201ENST00000539512 MAN2B1O00754 1011 aa9.16□□□□□ -0.94
TRAV11-201ENST00000539512 AMPD3Q01432 767 aa9.16□□□□□ -0.94
TRAV11-201ENST00000539512 SKOR2Q2VWA4 1001 aaPredicted RBP9.16□□□□□ -0.94
TRAV11-201ENST00000539512 BTBD8Q5XKL5 378 aa9.16□□□□□ -0.94
TRAV11-201ENST00000539512 GPR101Q96P66 508 aaPredicted RBP9.16□□□□□ -0.94
TRAV11-201ENST00000539512 FAM83GA6ND36 823 aa9.15□□□□□ -0.94
TRAV11-201ENST00000539512 ZEB2O60315 1214 aa9.15□□□□□ -0.94
TRAV11-201ENST00000539512 AMY2AP04746 511 aa9.15□□□□□ -0.94
TRAV11-201ENST00000539512 AMY2BP19961 511 aa9.15□□□□□ -0.94
TRAV11-201ENST00000539512 MECP2P51608 486 aaKnown RBP9.15□□□□□ -0.94
TRAV11-201ENST00000539512 YBX1P67809 324 aaKnown RBP9.15□□□□□ -0.94
TRAV11-201ENST00000539512 SRSF3P84103 164 aaKnown RBP9.15□□□□□ -0.94
TRAV11-201ENST00000539512 ETV3LQ6ZN32 361 aa9.15□□□□□ -0.94
TRAV11-201ENST00000539512 ZC3H18Q86VM9 953 aaKnown RBP9.15□□□□□ -0.94
TRAV11-201ENST00000539512 AFAP1L2Q8N4X5 818 aa9.15□□□□□ -0.94
TRAV11-201ENST00000539512 SCYL1Q96KG9 808 aa9.15□□□□□ -0.94
TRAV11-201ENST00000539512 APOBEC2Q9Y235 224 aaKnown RBP9.15□□□□□ -0.94
TRAV11-201ENST00000539512 TCRBV5S2A0A599 114 aa9.14□□□□□ -0.95
TRAV11-201ENST00000539512 TCRBV5S4A2TA0A5A2 114 aa9.14□□□□□ -0.95
TRAV11-201ENST00000539512 PRAMEF25A6NGN4 478 aa9.14□□□□□ -0.95
TRAV11-201ENST00000539512 LRRC10BA6NIK2 292 aa9.14□□□□□ -0.95
TRAV11-201ENST00000539512 CLASP2O75122 1294 aaKnown RBP9.14□□□□□ -0.95
TRAV11-201ENST00000539512 DSG1Q02413 1049 aa9.14□□□□□ -0.95
TRAV11-201ENST00000539512 GRIN1Q05586 938 aa9.14□□□□□ -0.95
TRAV11-201ENST00000539512 MLANAQ16655 118 aa9.14□□□□□ -0.95
TRAV11-201ENST00000539512 DDX42Q86XP3 938 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRAV11-201ENST00000539512 RBM12BQ8IXT5 1001 aaKnown RBP9.14□□□□□ -0.95
TRAV11-201ENST00000539512 SMC1BQ8NDV3 1235 aa9.14□□□□□ -0.95
TRAV11-201ENST00000539512 WDR66Q8TBY9 1149 aa9.14□□□□□ -0.95
TRAV11-201ENST00000539512 ZNF552Q9H707 407 aaPredicted RBP9.14□□□□□ -0.95
TRAV11-201ENST00000539512 FKBP9O95302 570 aa9.13□□□□□ -0.95
TRAV11-201ENST00000539512 VIPR1P32241 457 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms