RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CYP3A4P08684 503 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 TNNT1P13805 278 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 CCNE1P24864 410 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 UBXN1Q04323 297 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 STIM1Q13586 685 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 CNNM4Q6P4Q7 775 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 CCAR2Q8N163 923 aaKnown RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 ATRIPQ8WXE1 791 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 TRERF1Q96PN7 1200 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 ZNF577Q9BSK1 485 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 TMX1Q9H3N1 280 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 ZNF112Q9UJU3 913 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 CTDP1Q9Y5B0 961 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 DICER1Q9UPY3 1922 aaKnown RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 PLA2G6O60733 806 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 SLC12A3P55017 1021 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 MRPS9P82933 396 aaKnown RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 HERC4Q5GLZ8 1057 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 BANK1Q8NDB2 785 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 RUSC1Q9BVN2 902 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 BMP2KQ9NSY1 1161 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 LIMA1Q9UHB6 759 aaKnown RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 GAS7O60861 476 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 PSMD10O75832 226 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 GYPCP04921 128 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 PBX1P40424 430 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 VGLL4Q14135 290 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 SYTL5Q8TDW5 730 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-205ENST00000538545 CCDC47Q96A33 483 aaKnown RBP15.73■□□□□ 0.11
ACTN1-205ENST00000538545 NAP1L4Q99733 375 aaKnown RBP15.73■□□□□ 0.11
ACTN1-205ENST00000538545 UNC45AQ9H3U1 944 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 TMEM150BA6NC51 233 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 SOWAHDA6NJG2 315 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 RPA1P27694 616 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 HSD17B4P51659 736 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 HYIQ5T013 277 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 CLMNQ96JQ2 1002 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 CNOT6LQ96LI5 555 aaKnown RBP15.73■□□□□ 0.11
ACTN1-205ENST00000538545 FAM20AQ96MK3 541 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 NT5C3AQ9H0P0 336 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 TELO2Q9Y4R8 837 aa15.73■□□□□ 0.11
ACTN1-205ENST00000538545 SLITRK3O94933 977 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 EHHADHQ08426 723 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 BAATQ14032 418 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-205ENST00000538545 TREML2Q5T2D2 321 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 SNRNP48Q6IEG0 339 aaKnown RBP15.72■□□□□ 0.11
ACTN1-205ENST00000538545 TOGARAM2Q6ZUX3 1019 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 MAEAQ7L5Y9 396 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 CCDC155Q8N6L0 562 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 REEP2Q9BRK0 252 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 R3HDMLQ9H3Y0 253 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 KCNH7Q9NS40 1196 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 KDM3AQ9Y4C1 1321 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 IPO5O00410 1097 aaKnown RBP15.72■□□□□ 0.11
ACTN1-205ENST00000538545 FILIP1LQ4L180 1135 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 CT47A1Q5JQC4 288 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-205ENST00000538545 FAM26FQ5R3K3 315 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 HAUS3Q68CZ6 603 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 DHTKD1Q96HY7 919 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-205ENST00000538545 TBX3O15119 743 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 ATP9AO75110 1047 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 KCNA1Q09470 495 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 TMEM132BQ14DG7 1078 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 KSR1Q8IVT5 923 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.72■□□□□ 0.11
ACTN1-205ENST00000538545 BAG1Q99933 345 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-205ENST00000538545 TUBGCP2Q9BSJ2 902 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 RNF146Q9NTX7 359 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 DNM3Q9UQ16 869 aa15.72■□□□□ 0.11
ACTN1-205ENST00000538545 RLFQ13129 1914 aa15.71■□□□□ 0.11
ACTN1-205ENST00000538545 PHIPQ8WWQ0 1821 aa15.71■□□□□ 0.11
ACTN1-205ENST00000538545 PVALEFA0A1B0GWK0 134 aa15.71■□□□□ 0.11
ACTN1-205ENST00000538545 LRRC10BA6NIK2 292 aa15.71■□□□□ 0.11
ACTN1-205ENST00000538545 PPP1R13BQ96KQ4 1090 aa15.71■□□□□ 0.11
ACTN1-205ENST00000538545 SNCAIPQ9Y6H5 919 aa15.71■□□□□ 0.11
ACTN1-205ENST00000538545 UQCRHLA0A096LP55 91 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 UQCRHP07919 91 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 MTIF2P46199 727 aaKnown RBP15.71■□□□□ 0.1
ACTN1-205ENST00000538545 ITGB3BPQ13352 177 aaPredicted RBP15.71■□□□□ 0.1
ACTN1-205ENST00000538545 GIT2Q14161 759 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 CENPPQ6IPU0 288 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 RNF207Q6ZRF8 634 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 KRT26Q7Z3Y9 468 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 SFR1Q86XK3 245 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 RMDN3Q96TC7 470 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 MXRA8Q9BRK3 442 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 PARP14Q460N5 1801 aa15.71■□□□□ 0.1
ACTN1-205ENST00000538545 TESPA1A2RU30 521 aaPredicted RBP15.7■□□□□ 0.1
ACTN1-205ENST00000538545 ZBED4O75132 1171 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 USP14P54578 494 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 ERMNQ8TAM6 284 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 SLC5A5Q92911 643 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 CTAGE1Q96RT6 745 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 HSD17B14Q9BPX1 270 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 ELP3Q9H9T3 547 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 ZNF214Q9UL59 606 aaPredicted RBP15.7■□□□□ 0.1
ACTN1-205ENST00000538545 AKR1B15C9JRZ8 316 aaPredicted RBP15.7■□□□□ 0.1
ACTN1-205ENST00000538545 SP4Q02446 784 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 PPFIBP1Q86W92 1011 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms