RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
LIMK1-208ENST00000538333 KIF4BQ2VIQ3 1234 aa15.55■□□□□ 0.08
LIMK1-208ENST00000538333 FKBP1CQ5VVH2 108 aa15.55■□□□□ 0.08
LIMK1-208ENST00000538333 CDAN1Q8IWY9 1227 aa15.55■□□□□ 0.08
LIMK1-208ENST00000538333 GPR161Q8N6U8 529 aaKnown RBP15.55■□□□□ 0.08
LIMK1-208ENST00000538333 CYP2W1Q8TAV3 490 aa15.55■□□□□ 0.08
LIMK1-208ENST00000538333 PCMTD1Q96MG8 357 aaPredicted RBP15.55■□□□□ 0.08
LIMK1-208ENST00000538333 ATAD5Q96QE3 1844 aa15.55■□□□□ 0.08
LIMK1-208ENST00000538333 NAPGQ99747 312 aaPredicted RBP15.55■□□□□ 0.08
LIMK1-208ENST00000538333 KCTD10Q9H3F6 313 aa15.55■□□□□ 0.08
LIMK1-208ENST00000538333 PLAGL2Q9UPG8 496 aa15.55■□□□□ 0.08
LIMK1-208ENST00000538333 RBBP6Q7Z6E9 1792 aaKnown RBP15.54■□□□□ 0.08
LIMK1-208ENST00000538333 IGLV3-22A0A075B6J6 115 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 EIF3CLB5ME19 914 aaKnown RBP15.54■□□□□ 0.08
LIMK1-208ENST00000538333 PSMC6P62333 389 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
LIMK1-208ENST00000538333 FAM83BQ5T0W9 1011 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 NCAPH2Q6IBW4 605 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 SRGAP1Q7Z6B7 1085 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 CCDC84Q86UT8 332 aaPredicted RBP15.54■□□□□ 0.08
LIMK1-208ENST00000538333 ZC3H3Q8IXZ2 948 aaKnown RBP15.54■□□□□ 0.08
LIMK1-208ENST00000538333 OGFOD1Q8N543 542 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 ERMNQ8TAM6 284 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 SCFD1Q8WVM8 642 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 RABGGTAQ92696 567 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 EIF3CQ99613 913 aaKnown RBP15.54■□□□□ 0.08
LIMK1-208ENST00000538333 EPC1Q9H2F5 836 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 GOPCQ9HD26 462 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 ZNHIT6Q9NWK9 470 aaKnown RBP15.54■□□□□ 0.08
LIMK1-208ENST00000538333 TBC1D7Q9P0N9 293 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 COL4A3BPQ9Y5P4 624 aa15.54■□□□□ 0.08
LIMK1-208ENST00000538333 TBC1D12O60347 775 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 CYLC1P35663 651 aaPredicted RBP15.53■□□□□ 0.08
LIMK1-208ENST00000538333 KRT83P78385 493 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 AMPD2Q01433 879 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 HERC4Q5GLZ8 1057 aaPredicted RBP15.53■□□□□ 0.08
LIMK1-208ENST00000538333 SYT2Q8N9I0 419 aaPredicted RBP15.53■□□□□ 0.08
LIMK1-208ENST00000538333 MTMR14Q8NCE2 650 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 RANBP17Q9H2T7 1088 aaKnown RBP15.53■□□□□ 0.08
LIMK1-208ENST00000538333 GUCA1BQ9UMX6 200 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 ZRANB2O95218 330 aaKnown RBP eCLIP15.53■□□□□ 0.08
LIMK1-208ENST00000538333 ZSCAN20P17040 1043 aaPredicted RBP15.53■□□□□ 0.08
LIMK1-208ENST00000538333 MARSP56192 900 aaKnown RBP15.53■□□□□ 0.08
LIMK1-208ENST00000538333 TEX35Q5T0J7 233 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 GOLGA1Q92805 767 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 CEP63Q96MT8 703 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 TMEM39BQ9GZU3 492 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 FAM207AQ9NSI2 230 aaPredicted RBP15.53■□□□□ 0.08
LIMK1-208ENST00000538333 PGAP2Q9UHJ9 254 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 TFR2Q9UP52 801 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 STK24Q9Y6E0 443 aa15.53■□□□□ 0.08
LIMK1-208ENST00000538333 RCCD1A6NED2 376 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 TRAF5O00463 557 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 DPEP1P16444 411 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 BAG6P46379 1132 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 CHMP4BP1P59074 171 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 RAD51AP2Q09MP3 1159 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 TRAF1Q13077 416 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 GIT2Q14161 759 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 CEP112Q8N8E3 955 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 UBE2Q2Q8WVN8 375 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 TBC1D5Q92609 795 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 VPS33BQ9H267 617 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 VCPKMTQ9H867 229 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 EMILIN3Q9NT22 766 aa15.52■□□□□ 0.08
LIMK1-208ENST00000538333 ARGLU1Q9NWB6 273 aaPredicted RBP15.52■□□□□ 0.08
LIMK1-208ENST00000538333 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.52■□□□□ 0.08
LIMK1-208ENST00000538333 MEIS1O00470 390 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 ZNF263O14978 683 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 PLA2G6O60733 806 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 ERCC3P19447 782 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 KCNMA1Q12791 1236 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 PABPC4Q13310 644 aaKnown RBP eCLIP15.52■□□□□ 0.07
LIMK1-208ENST00000538333 FAM83AQ86UY5 434 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 AGBL3Q8NEM8 1001 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 BAP1Q92560 729 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 ZBED3Q96IU2 234 aaPredicted RBP15.52■□□□□ 0.07
LIMK1-208ENST00000538333 POLR3CQ9BUI4 534 aaPredicted RBP15.52■□□□□ 0.07
LIMK1-208ENST00000538333 WDR18Q9BV38 432 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 LACRTQ9GZZ8 138 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 VEZTQ9HBM0 779 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 ARHGAP20Q9P2F6 1191 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 DNM3Q9UQ16 869 aa15.52■□□□□ 0.07
LIMK1-208ENST00000538333 EML1O00423 815 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 KIF20AO95235 890 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 TFRCP02786 760 aaKnown RBP15.51■□□□□ 0.07
LIMK1-208ENST00000538333 CCDC122Q5T0U0 273 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 TRIM59Q8IWR1 403 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 SMAP1Q8IYB5 467 aaPredicted RBP15.51■□□□□ 0.07
LIMK1-208ENST00000538333 PURBQ96QR8 312 aaKnown RBP15.51■□□□□ 0.07
LIMK1-208ENST00000538333 REEP2Q9BRK0 252 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 MMRN2Q9H8L6 949 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 ZNRF3Q9ULT6 936 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 FHOD1Q9Y613 1164 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 PLEKP08567 350 aaPredicted RBP15.51■□□□□ 0.07
LIMK1-208ENST00000538333 CAP2P40123 477 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 CASP5P51878 434 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 MAP3K10Q02779 954 aa15.51■□□□□ 0.07
LIMK1-208ENST00000538333 EDRF1Q3B7T1 1238 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms