RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MMP1P03956 469 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 KRT1P04264 644 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 EIF2AK2P19525 551 aaKnown RBP18.22■□□□□ 0.51
SCARB1-205ENST00000538291 APBA1Q02410 837 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 RPF1Q9H9Y2 349 aaKnown RBP18.22■□□□□ 0.51
SCARB1-205ENST00000538291 UBN1Q9NPG3 1134 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 METP08581 1390 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 SPDYE2BA6NHP3 402 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 EFCAB8A8MWE9 144 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 ZNF853P0CG23 659 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 SPDYE6P0CI01 402 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 MXI1P50539 228 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 OSTNP61366 133 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 GUCY2DQ02846 1103 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 FAM8A1Q9UBU6 413 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 MECOMQ03112 1051 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 PIM2Q9P1W9 311 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 SH2B2O14492 632 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-205ENST00000538291 IFNAR1P17181 557 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 TMEM179Q6ZVK1 233 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 LRRC8AQ8IWT6 810 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 EMILIN3Q9NT22 766 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 SLFN14P0C7P3 912 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 CLNS1AP54105 237 aaKnown RBP18.21■□□□□ 0.51
SCARB1-205ENST00000538291 DSTYKQ6XUX3 929 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 ARHGEF18Q6ZSZ5 1173 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 ZNF589Q86UQ0 364 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-205ENST00000538291 RASEFQ8IZ41 740 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 C2orf69Q8N8R5 385 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 ZNF341Q9BYN7 854 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 KDM5AP29375 1690 aaKnown RBP18.21■□□□□ 0.51
SCARB1-205ENST00000538291 STX1BP61266 288 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 PPME1Q9Y570 386 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
SCARB1-205ENST00000538291 MYCP01106 439 aaPredicted RBP18.21■□□□□ 0.5
SCARB1-205ENST00000538291 CDK8P49336 464 aa18.21■□□□□ 0.5
SCARB1-205ENST00000538291 PSMD2Q13200 908 aa18.21■□□□□ 0.5
SCARB1-205ENST00000538291 SPDYE1Q8NFV5 336 aaPredicted RBP18.21■□□□□ 0.5
SCARB1-205ENST00000538291 PIGBQ92521 554 aa18.21■□□□□ 0.5
SCARB1-205ENST00000538291 SLC4A1P02730 911 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 THOC5Q13769 683 aaKnown RBP18.2■□□□□ 0.5
SCARB1-205ENST00000538291 CLEC4GQ6UXB4 293 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 PUS7LQ9H0K6 701 aaKnown RBP18.2■□□□□ 0.5
SCARB1-205ENST00000538291 SART1O43290 800 aaKnown RBP18.2■□□□□ 0.5
SCARB1-205ENST00000538291 PLA2G4BP0C869 781 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 KIF23Q02241 960 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-205ENST00000538291 SGO2Q562F6 1265 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 RNF207Q6ZRF8 634 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 UBE2TQ9NPD8 197 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-205ENST00000538291 GCNT4Q9P109 453 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 MGEA5O60502 916 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 KPNA2P52292 529 aaKnown RBP18.2■□□□□ 0.5
SCARB1-205ENST00000538291 EPHB1P54762 984 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 SLFN12LQ6IEE8 588 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 PI16Q6UXB8 463 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 JRKLQ9Y4A0 524 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 COBLO75128 1261 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 SRGAP2CP0DJJ0 459 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 UBE2SQ16763 222 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 MICAL1Q8TDZ2 1067 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 PPP1R16BQ96T49 567 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 SPZ1Q9BXG8 430 aa18.2■□□□□ 0.5
SCARB1-205ENST00000538291 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 F8W8V4 182 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 K7ERI5 159 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 PRPSAP2O60256 369 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 ATP1A2P50993 1020 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 CFAP61Q8NHU2 1237 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 PLEKHF1Q96S99 279 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 CALN1Q9BXU9 219 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 DAAM1Q9Y4D1 1078 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 TTC4O95801 387 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 CD58P19256 250 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 IL9RQ01113 521 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 TRIM42Q8IWZ5 723 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 KCTD6Q8NC69 237 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 TCP11Q8WWU5 503 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 LRGUKQ96M69 825 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 HEXIM2Q96MH2 286 aaKnown RBP18.19■□□□□ 0.5
SCARB1-205ENST00000538291 NLRP4Q96MN2 994 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 NFKBIAP25963 317 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 DDIT3P35638 169 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 DARS2Q6PI48 645 aaKnown RBP18.19■□□□□ 0.5
SCARB1-205ENST00000538291 OSBP2Q969R2 916 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 ZBED2Q9BTP6 218 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 MSTO1Q9BUK6 570 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 FBXO40Q9UH90 709 aa18.19■□□□□ 0.5
SCARB1-205ENST00000538291 C21orf2O43822 256 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 MUM1Q2TAK8 710 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 CATSPER4Q7RTX7 472 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 FAM49AQ9H0Q0 323 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-205ENST00000538291 ARL13BQ3SXY8 428 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 ZSWIM5Q9P217 1185 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 RPS6KA4O75676 772 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 ECEL1O95672 775 aa18.18■□□□□ 0.5
SCARB1-205ENST00000538291 Q9H521 79 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms