RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 KSR1Q8IVT5 923 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 NPLOC4Q8TAT6 608 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 PDCD2LQ9BRP1 358 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 MROH8Q9H579 483 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 MRPL44Q9H9J2 332 aaKnown RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 JPH1Q9HDC5 661 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 SLC39A2Q9NP94 309 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 LRFN2Q9ULH4 789 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 PCDHB13Q9Y5F0 798 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 FOSP01100 380 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 DLATP10515 647 aaKnown RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 TMOD1P28289 359 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 MCM6Q14566 821 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 HSDL1Q3SXM5 330 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 CEP57Q86XR8 500 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 MB21D1Q8N884 522 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 SCLYQ96I15 445 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 TMEM60Q9H2L4 133 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 GPRC5CQ9NQ84 441 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 RPAP1Q9BWH6 1393 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 PALM3A6NDB9 673 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 TRAK2O60296 914 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 MMP1P03956 469 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 ODR4Q5SWX8 454 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 IFT74Q96LB3 600 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 WDR18Q9BV38 432 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 SCAND2PQ9GZW5 306 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 CSRNP2Q9H175 543 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 NUP62CLQ9H1M0 184 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 EXOC1Q9NV70 894 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 CYP39A1Q9NYL5 469 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 ZNF215Q9UL58 517 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 F5P12259 2224 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 NHSQ6T4R5 1651 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 A0A0G2JLL6 359 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 NPHP3-ACAD11A0A0J9YXS1 232 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 PRKCSHP14314 528 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 PRRT2Q7Z6L0 340 aaPredicted RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 CTU1Q7Z7A3 348 aaKnown RBP8.08□□□□□ -1.12
MSH6-209ENST00000538136 MCOLN1Q9GZU1 580 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 DNAJC25Q9H1X3 360 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 SLC9A2Q9UBY0 812 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 SRRDQ9UH36 339 aa8.08□□□□□ -1.12
MSH6-209ENST00000538136 RGPD1P0DJD0 1748 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 ADAMTS3O15072 1205 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 CLIC2O15247 247 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 ZEB2O60315 1214 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 CCDC40Q4G0X9 1142 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 TRMT44Q8IYL2 757 aaKnown RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 NRBP2Q9NSY0 501 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 MTMR6Q9Y217 621 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 ZC3H4Q9UPT8 1303 aaKnown RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 SCN9AQ15858 1988 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 DENND3A2RUS2 1198 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 STXBP3O00186 592 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 SLC37A4O43826 429 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 FARP2O94887 1054 aaPredicted RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 CTDNEP1O95476 244 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 TNNT1P13805 278 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 FDPSP14324 419 aaKnown RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 DNA2P51530 1060 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 NLRP11P59045 1033 aaKnown RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 GRIN1Q05586 938 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 SYMPKQ92797 1274 aaKnown RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 ZNF302Q9NR11 478 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 COL20A1Q9P218 1284 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 SERTAD1Q9UHV2 236 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 DCDC2CA8MYV0 355 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 H3BRB1 525 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 PPP1R11O60927 126 aaPredicted RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 SERPINC1P01008 464 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 DNAJB2P25686 324 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 ALDH5A1P51649 535 aaPredicted RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 NAP1L1P55209 391 aaKnown RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 TAF12Q16514 161 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 FSCN1Q16658 493 aaKnown RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 DNTTIP2Q5QJE6 756 aaKnown RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 MIS18BP1Q6P0N0 1132 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 FILIP1Q7Z7B0 1213 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 SGMS1Q86VZ5 419 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 RNF149Q8NC42 400 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 CHST13Q8NET6 341 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 ST13P5Q8NFI4 369 aaPredicted RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 DRC1Q96MC2 740 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 APOL5Q9BWW9 433 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 TUT1Q9H6E5 874 aaKnown RBP8.07□□□□□ -1.12
MSH6-209ENST00000538136 KLK14Q9P0G3 267 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 CNTNAP5Q8WYK1 1306 aa8.07□□□□□ -1.12
MSH6-209ENST00000538136 GH1P01241 217 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 CCL5P13501 91 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 PTPREP23469 700 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 NUMBP49757 651 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 SV2BQ7L1I2 683 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 DNAJB3Q8WWF6 145 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 GMCL1Q96IK5 515 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 LXNQ9BS40 222 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 ABHD16BQ9H3Z7 469 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 ANAPC4Q9UJX5 808 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 ZNF214Q9UL59 606 aaPredicted RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 PRG3Q9Y2Y8 225 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms