RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 DNM3Q9UQ16 869 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 SCN7AQ01118 1682 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 LAMB2P55268 1798 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 ITIH6Q6UXX5 1313 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 TMCO5BA8MYB1 307 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 RGL2O15211 777 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 USO1O60763 962 aaKnown RBP9.63□□□□□ -0.87
UBE3B-208ENST00000538070 TBCAO75347 108 aaKnown RBP9.63□□□□□ -0.87
UBE3B-208ENST00000538070 FGFR1OPO95684 399 aaKnown RBP9.63□□□□□ -0.87
UBE3B-208ENST00000538070 NR2F2P24468 414 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 DMTNQ08495 405 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 DGKZQ13574 1117 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 RRP1BQ14684 758 aaKnown RBP9.63□□□□□ -0.87
UBE3B-208ENST00000538070 DLGAP5Q15398 846 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 SFR1Q86XK3 245 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 RABGGTAQ92696 567 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 P2RX7Q99572 595 aaKnown RBP9.63□□□□□ -0.87
UBE3B-208ENST00000538070 PACSIN2Q9UNF0 486 aaPredicted RBP9.63□□□□□ -0.87
UBE3B-208ENST00000538070 FAM86B1E9PN63 330 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 FAM86B2P0C5J1 330 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 NOP2P46087 812 aaKnown RBP9.63□□□□□ -0.87
UBE3B-208ENST00000538070 CASP5P51878 434 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 KIF11P52732 1056 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 SLC7A5Q01650 507 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 EZH2Q15910 746 aaKnown RBP9.63□□□□□ -0.87
UBE3B-208ENST00000538070 MAN2A1Q16706 1144 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 DACT2Q5SW24 774 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 FAM133AQ8N9E0 248 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 SPAG5Q96R06 1193 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 VPS18Q9P253 973 aa9.63□□□□□ -0.87
UBE3B-208ENST00000538070 RASSF10A6NK89 507 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 FXR2P51116 673 aaKnown RBP eCLIP9.62□□□□□ -0.87
UBE3B-208ENST00000538070 KCNA1Q09470 495 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 CATSPER3Q86XQ3 398 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 MYCT1Q8N699 235 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
UBE3B-208ENST00000538070 GOLPH3Q9H4A6 298 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 HAUS4Q9H6D7 363 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 N4BP1O75113 896 aaKnown RBP9.62□□□□□ -0.87
UBE3B-208ENST00000538070 MYL1P05976 194 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 LMAN1P49257 510 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 FKBP3Q00688 224 aaKnown RBP9.62□□□□□ -0.87
UBE3B-208ENST00000538070 STRIP1Q5VSL9 837 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 NFRKBQ6P4R8 1299 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 ZDHHC15Q96MV8 337 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 GLIS2Q9BZE0 524 aaPredicted RBP9.62□□□□□ -0.87
UBE3B-208ENST00000538070 RABEP2Q9H5N1 569 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 ADAMTS1Q9UHI8 967 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 COL4A3BPQ9Y5P4 624 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 COL5A3P25940 1745 aaPredicted RBP9.62□□□□□ -0.87
UBE3B-208ENST00000538070 ESYT2A0FGR8 921 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 ERLIN1O75477 346 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 TBC1D8O95759 1140 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 FTCDO95954 541 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 MYBP10242 640 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 CYP2J2P51589 502 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 CC2D2BQ6DHV5 1058 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 CENPPQ6IPU0 288 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 TMEM179Q6ZVK1 233 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 ERMNQ8TAM6 284 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 DHX36Q9H2U1 1008 aaKnown RBP9.62□□□□□ -0.87
UBE3B-208ENST00000538070 ARHGAP20Q9P2F6 1191 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 CTDP1Q9Y5B0 961 aaPredicted RBP9.62□□□□□ -0.87
UBE3B-208ENST00000538070 PCDHA13Q9Y5I0 950 aa9.62□□□□□ -0.87
UBE3B-208ENST00000538070 MEIS2O14770 477 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 PRKG1Q13976 671 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 GUF1Q8N442 669 aaKnown RBP9.61□□□□□ -0.87
UBE3B-208ENST00000538070 CCDC43Q96MW1 224 aaKnown RBP9.61□□□□□ -0.87
UBE3B-208ENST00000538070 NT5C3AQ9H0P0 336 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 ANKZF1Q9H8Y5 726 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 MAGEF1Q9HAY2 307 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 PRR12Q9ULL5 1215 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 CAPN6Q9Y6Q1 641 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 WNK3Q9BYP7 1800 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 A0A1W2PQC6 194 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 CETN3O15182 167 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 TACC1O75410 805 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 FAM13AO94988 1023 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 SNHG28P0DPA3 235 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 PDIA5Q14554 519 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 TERF2Q15554 542 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 ZC2HC1CQ53FD0 456 aaPredicted RBP9.61□□□□□ -0.87
UBE3B-208ENST00000538070 HSP90B2PQ58FF3 399 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 PRAMEF18Q5VWM3 479 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 SIAH1Q8IUQ4 282 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 DNAJC7Q99615 494 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 REEP2Q9BRK0 252 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 TCEAL9Q9UHQ7 104 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 FZD1Q9UP38 647 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 CASZ1Q86V15 1759 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 IGKV6D-41A0A0C4DH26 115 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 PVALEFA0A1B0GWK0 134 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 SHTN1A0MZ66 631 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 ZNF263O14978 683 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 CYP11B2P19099 503 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 NMT1P30419 496 aaKnown RBP9.61□□□□□ -0.87
UBE3B-208ENST00000538070 USP8P40818 1118 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 STAT2P52630 851 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms