RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 GHRHRQ02643 423 aa15.06■□□□□ 0
SMG6-203ENST00000536871 PPP2R5CQ13362 524 aa15.06■□□□□ 0
SMG6-203ENST00000536871 ECM1Q16610 540 aa15.06■□□□□ 0
SMG6-203ENST00000536871 ZCWPW2Q504Y3 356 aa15.06■□□□□ 0
SMG6-203ENST00000536871 NCAPH2Q6IBW4 605 aa15.06■□□□□ 0
SMG6-203ENST00000536871 POTEBQ6S5H4 581 aa15.06■□□□□ 0
SMG6-203ENST00000536871 CATSPER3Q86XQ3 398 aa15.06■□□□□ 0
SMG6-203ENST00000536871 ZNF710Q8N1W2 664 aa15.06■□□□□ 0
SMG6-203ENST00000536871 TXLNBQ8N3L3 684 aa15.06■□□□□ 0
SMG6-203ENST00000536871 PRPF38AQ8NAV1 312 aaKnown RBP15.06■□□□□ 0
SMG6-203ENST00000536871 MNS1Q8NEH6 495 aa15.06■□□□□ 0
SMG6-203ENST00000536871 NEK9Q8TD19 979 aa15.06■□□□□ 0
SMG6-203ENST00000536871 TTYH3Q9C0H2 523 aa15.06■□□□□ 0
SMG6-203ENST00000536871 KIAA1683Q9H0B3 1180 aa15.06■□□□□ 0
SMG6-203ENST00000536871 NDST4Q9H3R1 872 aa15.06■□□□□ 0
SMG6-203ENST00000536871 KCND2Q9NZV8 630 aa15.06■□□□□ 0
SMG6-203ENST00000536871 FAM184BQ9ULE4 1060 aa15.06■□□□□ 0
SMG6-203ENST00000536871 EPN1Q9Y6I3 576 aaPredicted RBP15.06■□□□□ 0
SMG6-203ENST00000536871 COL4A5P29400 1685 aa15.05■□□□□ 0
SMG6-203ENST00000536871 A0A0U1RQG5 324 aaPredicted RBP15.05■□□□□ -0
SMG6-203ENST00000536871 E9PMD0 336 aa15.05■□□□□ -0
SMG6-203ENST00000536871 CTNND1O60716 968 aaKnown RBP15.05■□□□□ -0
SMG6-203ENST00000536871 MED24O75448 989 aa15.05■□□□□ -0
SMG6-203ENST00000536871 URI1O94763 535 aaPredicted RBP15.05■□□□□ -0
SMG6-203ENST00000536871 EYA4O95677 639 aa15.05■□□□□ -0
SMG6-203ENST00000536871 ICAM1P05362 532 aa15.05■□□□□ -0
SMG6-203ENST00000536871 HERC4Q5GLZ8 1057 aaPredicted RBP15.05■□□□□ -0
SMG6-203ENST00000536871 MIIPQ5JXC2 388 aa15.05■□□□□ -0
SMG6-203ENST00000536871 NIPA1Q7RTP0 329 aa15.05■□□□□ -0
SMG6-203ENST00000536871 KIFC2Q96AC6 838 aa15.05■□□□□ -0
SMG6-203ENST00000536871 PCMTD1Q96MG8 357 aaPredicted RBP15.05■□□□□ -0
SMG6-203ENST00000536871 FEZ1Q99689 392 aa15.05■□□□□ -0
SMG6-203ENST00000536871 PDGFDQ9GZP0 370 aaPredicted RBP15.05■□□□□ -0
SMG6-203ENST00000536871 HAUS4Q9H6D7 363 aa15.05■□□□□ -0
SMG6-203ENST00000536871 VAV3Q9UKW4 847 aa15.05■□□□□ -0
SMG6-203ENST00000536871 CD2APQ9Y5K6 639 aa15.05■□□□□ -0
SMG6-203ENST00000536871 COL4A3BPQ9Y5P4 624 aa15.05■□□□□ -0
SMG6-203ENST00000536871 IGLV3-22A0A075B6J6 115 aa15.04■□□□□ -0
SMG6-203ENST00000536871 EFCAB8A8MWE9 144 aa15.04■□□□□ -0
SMG6-203ENST00000536871 NDUFA10O95299 355 aa15.04■□□□□ -0
SMG6-203ENST00000536871 CFBP00751 764 aa15.04■□□□□ -0
SMG6-203ENST00000536871 BCRP11274 1271 aa15.04■□□□□ -0
SMG6-203ENST00000536871 HNRNPH3P31942 346 aaKnown RBP15.04■□□□□ -0
SMG6-203ENST00000536871 PTGER2P43116 358 aa15.04■□□□□ -0
SMG6-203ENST00000536871 USP14P54578 494 aa15.04■□□□□ -0
SMG6-203ENST00000536871 RASA3Q14644 834 aa15.04■□□□□ -0
SMG6-203ENST00000536871 CEP55Q53EZ4 464 aa15.04■□□□□ -0
SMG6-203ENST00000536871 DCAF15Q66K64 600 aa15.04■□□□□ -0
SMG6-203ENST00000536871 LRRC55Q6ZSA7 311 aa15.04■□□□□ -0
SMG6-203ENST00000536871 ZC3H3Q8IXZ2 948 aaKnown RBP15.04■□□□□ -0
SMG6-203ENST00000536871 SLC5A5Q92911 643 aa15.04■□□□□ -0
SMG6-203ENST00000536871 MAF1Q9H063 256 aa15.04■□□□□ -0
SMG6-203ENST00000536871 SNAP25P60880 206 aa15.03■□□□□ -0
SMG6-203ENST00000536871 ERVK-24P63145 666 aa15.03■□□□□ -0
SMG6-203ENST00000536871 MAP3K9P80192 1104 aa15.03■□□□□ -0
SMG6-203ENST00000536871 LRCH2Q5VUJ6 765 aa15.03■□□□□ -0
SMG6-203ENST00000536871 LDHDQ86WU2 507 aa15.03■□□□□ -0
SMG6-203ENST00000536871 RIT2Q99578 217 aa15.03■□□□□ -0
SMG6-203ENST00000536871 SLF1Q9BQI6 1058 aa15.03■□□□□ -0
SMG6-203ENST00000536871 DESI2Q9BSY9 194 aa15.03■□□□□ -0
SMG6-203ENST00000536871 EMILIN3Q9NT22 766 aa15.03■□□□□ -0
SMG6-203ENST00000536871 PCDHA2Q9Y5H9 948 aa15.03■□□□□ -0
SMG6-203ENST00000536871 SPATA31C1P0DKV0 1188 aa15.03■□□□□ -0
SMG6-203ENST00000536871 HOXA13P31271 388 aaPredicted RBP15.03■□□□□ -0
SMG6-203ENST00000536871 HSD17B4P51659 736 aa15.03■□□□□ -0
SMG6-203ENST00000536871 PDE4CQ08493 712 aa15.03■□□□□ -0
SMG6-203ENST00000536871 STXBP4Q6ZWJ1 553 aa15.03■□□□□ -0
SMG6-203ENST00000536871 MIGA2Q7L4E1 593 aa15.03■□□□□ -0
SMG6-203ENST00000536871 UBXN4Q92575 508 aa15.03■□□□□ -0
SMG6-203ENST00000536871 P2RX7Q99572 595 aaKnown RBP15.03■□□□□ -0
SMG6-203ENST00000536871 EIF2AK1Q9BQI3 630 aaKnown RBP15.03■□□□□ -0
SMG6-203ENST00000536871 MRPL44Q9H9J2 332 aaKnown RBP15.03■□□□□ -0
SMG6-203ENST00000536871 SEL1LQ9UBV2 794 aa15.03■□□□□ -0
SMG6-203ENST00000536871 PHF20L1A8MW92 1017 aa15.02■□□□□ -0
SMG6-203ENST00000536871 TRAF5O00463 557 aa15.02■□□□□ -0
SMG6-203ENST00000536871 CETN3O15182 167 aa15.02■□□□□ -0
SMG6-203ENST00000536871 TBCAO75347 108 aaKnown RBP15.02■□□□□ -0
SMG6-203ENST00000536871 PSMD10O75832 226 aa15.02■□□□□ -0
SMG6-203ENST00000536871 PRELPP51888 382 aa15.02■□□□□ -0
SMG6-203ENST00000536871 MTF1Q14872 753 aa15.02■□□□□ -0
SMG6-203ENST00000536871 NBPF9Q3BBW0 867 aa15.02■□□□□ -0
SMG6-203ENST00000536871 CCDC40Q4G0X9 1142 aa15.02■□□□□ -0
SMG6-203ENST00000536871 KIAA1755Q5JYT7 1200 aa15.02■□□□□ -0
SMG6-203ENST00000536871 CCDC174Q6PII3 467 aa15.02■□□□□ -0
SMG6-203ENST00000536871 OTOP1Q7RTM1 612 aa15.02■□□□□ -0
SMG6-203ENST00000536871 HSD17B14Q9BPX1 270 aa15.02■□□□□ -0
SMG6-203ENST00000536871 ZNF341Q9BYN7 854 aa15.02■□□□□ -0
SMG6-203ENST00000536871 TSGA10Q9BZW7 698 aa15.02■□□□□ -0
SMG6-203ENST00000536871 OLFML3Q9NRN5 406 aa15.02■□□□□ -0
SMG6-203ENST00000536871 TRAF3IP3Q9Y228 551 aa15.02■□□□□ -0
SMG6-203ENST00000536871 UBE4BO95155 1302 aa15.02□□□□□ -0.01
SMG6-203ENST00000536871 CTAGE9A4FU28 777 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 POTEFA5A3E0 1075 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 EIF3CLB5ME19 914 aaKnown RBP15.01□□□□□ -0.01
SMG6-203ENST00000536871 MEIS1O00470 390 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 PDXKO00764 312 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 CALUO43852 315 aaPredicted RBP15.01□□□□□ -0.01
SMG6-203ENST00000536871 GAS7O60861 476 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 POTEIP0CG38 1075 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 RPL13P26373 211 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms