RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
CHD4-203ENST00000535717 MLXIPQ9HAP2 919 aa13.7□□□□□ -0.22
CHD4-203ENST00000535717 PHF24Q9UPV7 400 aa13.7□□□□□ -0.22
CHD4-203ENST00000535717 TELO2Q9Y4R8 837 aa13.7□□□□□ -0.22
CHD4-203ENST00000535717 DOCK5Q9H7D0 1870 aa13.7□□□□□ -0.22
CHD4-203ENST00000535717 WNT7AO00755 349 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 SLC37A4O43826 429 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 CCNT1O60563 726 aaKnown RBP13.69□□□□□ -0.22
CHD4-203ENST00000535717 ASGR1P07306 291 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 MMP3P08254 477 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 SYT1P21579 422 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 ACLYP53396 1101 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 HSDL1Q3SXM5 330 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 PCSK9Q8NBP7 692 aaKnown RBP13.69□□□□□ -0.22
CHD4-203ENST00000535717 GIMAP8Q8ND71 665 aaPredicted RBP13.69□□□□□ -0.22
CHD4-203ENST00000535717 PPTC7Q8NI37 304 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 FERMT2Q96AC1 680 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 ZNF577Q9BSK1 485 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 C11orf49Q9H6J7 331 aa13.69□□□□□ -0.22
CHD4-203ENST00000535717 DDX25Q9UHL0 483 aaKnown RBP13.69□□□□□ -0.22
CHD4-203ENST00000535717 NFASCO94856 1347 aa13.68□□□□□ -0.22
CHD4-203ENST00000535717 A0A1W2PQ45 241 aaPredicted RBP13.68□□□□□ -0.22
CHD4-203ENST00000535717 A0A1W2PQY0 241 aa13.68□□□□□ -0.22
CHD4-203ENST00000535717 VPS37CA5D8V6 355 aaPredicted RBP13.68□□□□□ -0.22
CHD4-203ENST00000535717 MOXD2PA6NHM9 499 aa13.68□□□□□ -0.22
CHD4-203ENST00000535717 IPO5O00410 1097 aaKnown RBP13.68□□□□□ -0.22
CHD4-203ENST00000535717 MSH4O15457 936 aa13.68□□□□□ -0.22
CHD4-203ENST00000535717 DHX15O43143 795 aaKnown RBP13.68□□□□□ -0.22
CHD4-203ENST00000535717 GCFC2P16383 781 aaKnown RBP13.68□□□□□ -0.22
CHD4-203ENST00000535717 BECN1Q14457 450 aa13.68□□□□□ -0.22
CHD4-203ENST00000535717 BRDTQ58F21 947 aaPredicted RBP13.68□□□□□ -0.22
CHD4-203ENST00000535717 CXCL17Q6UXB2 119 aa13.68□□□□□ -0.22
CHD4-203ENST00000535717 NECAB2Q7Z6G3 386 aa13.68□□□□□ -0.22
CHD4-203ENST00000535717 NAP1L4Q99733 375 aaKnown RBP13.68□□□□□ -0.22
CHD4-203ENST00000535717 SENP6Q9GZR1 1112 aaPredicted RBP13.68□□□□□ -0.22
CHD4-203ENST00000535717 ZEB2O60315 1214 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 MYL3P08590 195 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 HOXD8P13378 290 aaPredicted RBP13.67□□□□□ -0.22
CHD4-203ENST00000535717 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 PURAQ00577 322 aaKnown RBP13.67□□□□□ -0.22
CHD4-203ENST00000535717 SP4Q02446 784 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
CHD4-203ENST00000535717 ETNPPLQ8TBG4 499 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 SLC5A5Q92911 643 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 GJA10Q969M2 543 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 GPR20Q99678 358 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 SDF4Q9BRK5 362 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 JPH1Q9HDC5 661 aaPredicted RBP13.67□□□□□ -0.22
CHD4-203ENST00000535717 POLR3EQ9NVU0 708 aa13.67□□□□□ -0.22
CHD4-203ENST00000535717 TNRC18O15417 2968 aaPredicted RBP13.66□□□□□ -0.22
CHD4-203ENST00000535717 GSTTP1A0A1W2PQM5 241 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 DDX39AO00148 427 aaKnown RBP13.66□□□□□ -0.22
CHD4-203ENST00000535717 NOP56O00567 594 aaKnown RBP13.66□□□□□ -0.22
CHD4-203ENST00000535717 STX6O43752 255 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 KPNA6O60684 536 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 PPFIA4O75335 1185 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 CCNE2O96020 404 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 TRAPPC10P48553 1259 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 RGS19P49795 217 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 TOB1P50616 345 aaPredicted RBP13.66□□□□□ -0.22
CHD4-203ENST00000535717 DGKDQ16760 1214 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 KCNMB3Q9NPA1 279 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 TBC1D22BQ9NU19 505 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 MTMR6Q9Y217 621 aa13.66□□□□□ -0.22
CHD4-203ENST00000535717 PSMD10O75832 226 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 ZNF286BP0CG31 522 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 MCM7P33993 719 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 ACTR2P61160 394 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 NBR1Q14596 966 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 ZNF174Q15697 407 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 TTC38Q5R3I4 469 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 SEPT1Q8WYJ6 367 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 KAT2BQ92831 832 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 HAS1Q92839 578 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 GLT1D1Q96MS3 346 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 RIT2Q99578 217 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 MTG1Q9BT17 334 aaPredicted RBP13.65□□□□□ -0.22
CHD4-203ENST00000535717 STARD7Q9NQZ5 370 aa13.65□□□□□ -0.22
CHD4-203ENST00000535717 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
CHD4-203ENST00000535717 RBM19Q9Y4C8 960 aaKnown RBP13.65□□□□□ -0.22
CHD4-203ENST00000535717 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 ELP1O95163 1332 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 TBX3O15119 743 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 NEMFO60524 1076 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 GAS7O60861 476 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 CABYRO75952 493 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 TCF7P36402 384 aaPredicted RBP13.64□□□□□ -0.23
CHD4-203ENST00000535717 ATN1P54259 1190 aaPredicted RBP13.64□□□□□ -0.23
CHD4-203ENST00000535717 PSMC6P62333 389 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 RESTQ13127 1097 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 LRRC26Q2I0M4 334 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 LRCH2Q5VUJ6 765 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 SLC39A5Q6ZMH5 540 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 BRAPQ7Z569 592 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 VTI1AQ96AJ9 217 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 FAM20AQ96MK3 541 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms