RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 TJAP1Q5JTD0 557 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 MICU3Q86XE3 530 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 TMTC2Q8N394 836 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 RGS22Q8NE09 1264 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 DNERQ8NFT8 737 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 OR6J1Q8NGC5 347 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 NSUN6Q8TEA1 469 aaKnown RBP10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 COPS5Q92905 334 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 GDF15Q99988 308 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 UPF3AQ9H1J1 476 aaKnown RBP10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 TMEM39AQ9NV64 488 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 EVA1BQ9NVM1 165 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 SEC63Q9UGP8 760 aaKnown RBP10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 CEP290O15078 2479 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 MYH6P13533 1939 aa10.33□□□□□ -0.76
CCDC90B-219ENST00000534753 DNAH12Q6ZR08 3092 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 ZBBXA8MT70 800 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 GCOM1H8Y6P7 765 aaPredicted RBP10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 CLTBP09497 229 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 POLR2MP0CAP2 368 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 FXR1P51114 621 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 PSMC6P62333 389 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 KCNH2Q12809 1159 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 PPP2R5BQ15173 497 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 STXBP2Q15833 593 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 DUSP28Q4G0W2 176 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 PTCRAQ6ISU1 281 aaPredicted RBP10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 MORC4Q8TE76 937 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 SCFD2Q8WU76 684 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 PPP1R13LQ8WUF5 828 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 BADQ92934 168 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 JAKMIP1Q96N16 626 aaKnown RBP10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 RIOX1Q9H6W3 641 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 PDLIM7Q9NR12 457 aa10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 TFIP11Q9UBB9 837 aaKnown RBP10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 GNEQ9Y223 722 aaKnown RBP10.32□□□□□ -0.76
CCDC90B-219ENST00000534753 LRRC37A2A6NM11 1700 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 A0A0U1RQG5 324 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 TRIM43BA6NCK2 446 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 PIK3CDO00329 1044 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 OPLAHO14841 1288 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 CTAGE5O15320 804 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 CALM1P0DP23 149 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 CALM2P0DP24 149 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 CALM3P0DP25 149 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 RAG1P15918 1043 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 CST5P28325 142 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 LIFRP42702 1097 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 GNAQP50148 359 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 TRAF1Q13077 416 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 KRT32Q14532 448 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 TTLL4Q14679 1199 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 SNX17Q15036 470 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 LY6KQ17RY6 165 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 BRDTQ58F21 947 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 FAM47CQ5HY64 1035 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 CCSAPQ6IQ19 270 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 DHX32Q7L7V1 743 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 SRBD1Q8N5C6 995 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 FANCBQ8NB91 859 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 TRIM43Q96BQ3 446 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 MTMR8Q96EF0 704 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 OCSTAMPQ9BR26 566 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 LZTS2Q9BRK4 669 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 PXMP2Q9NR77 195 aa10.31□□□□□ -0.76
CCDC90B-219ENST00000534753 LOC102724159A0A0B4J2E5 919 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 KLF18A0A0U1RQI7 1052 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 ARVCFO00192 962 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 TLR3O15455 904 aaKnown RBP10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 REC8O95072 547 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 ARIH2O95376 493 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 NR3C2P08235 984 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 CPT1AP50416 773 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 HSD17B4P51659 736 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 FAAP100Q0VG06 881 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 ITGA7Q13683 1181 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 PWP2Q15269 919 aaKnown RBP10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 HEATR3Q7Z4Q2 680 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 TDHQ8IZJ6 230 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 SMARCC2Q8TAQ2 1214 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 CUL5Q93034 780 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 IWS1Q96ST2 819 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 MTA3Q9BTC8 594 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 SPZ1Q9BXG8 430 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 PRO3102Q9H379 93 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 BRPF3Q9ULD4 1205 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 SNX14Q9Y5W7 946 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 MRVI1Q9Y6F6 885 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 ELP1O95163 1332 aa10.3□□□□□ -0.76
CCDC90B-219ENST00000534753 BAZ2BQ9UIF8 2168 aaKnown RBP10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 RBM47A0AV96 593 aaKnown RBP10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 GOLGA8AA7E2F4 631 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 GOLGA8BA8MQT2 603 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 SOX1O00570 391 aaPredicted RBP10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 ZBTB43O43298 467 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 EIF3JO75822 258 aaKnown RBP10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 CABYRO75952 493 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 EDNRBP24530 442 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 ITGB8P26012 769 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 BMP8BP34820 402 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms