RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 NYAP2Q9P242 653 aa7.71□□□□□ -1.18
CD44-237ENST00000534082 GTF2IRD1Q9UHL9 959 aa7.71□□□□□ -1.18
CD44-237ENST00000534082 ISY1Q9ULR0 285 aaKnown RBP7.71□□□□□ -1.18
CD44-237ENST00000534082 BARX2Q9UMQ3 279 aaPredicted RBP7.71□□□□□ -1.18
CD44-237ENST00000534082 EMSYQ7Z589 1322 aa7.71□□□□□ -1.18
CD44-237ENST00000534082 ZNF532Q9HCE3 1301 aa7.71□□□□□ -1.18
CD44-237ENST00000534082 ANKRD11Q6UB99 2663 aaPredicted RBP7.71□□□□□ -1.18
CD44-237ENST00000534082 BAZ2AQ9UIF9 1905 aaKnown RBP7.7□□□□□ -1.18
CD44-237ENST00000534082 TCRBV5S4A2TA0A5A2 114 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 MBD4O95243 580 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 GLP2RO95838 553 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 BMPR1AP36894 532 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 STAT2P52630 851 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 PDE4BQ07343 736 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 PTK7Q13308 1070 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 HIC1Q14526 733 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 PLEKHG4Q58EX7 1191 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 ADGRD2Q7Z7M1 963 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 FIBCD1Q8N539 461 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 EFHBQ8N7U6 833 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 KREMEN2Q8NCW0 462 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 KCNG4Q8TDN1 519 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 SCFD2Q8WU76 684 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 TOP1MTQ969P6 601 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 CLIP2Q9UDT6 1046 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 ADD3Q9UEY8 706 aaKnown RBP7.7□□□□□ -1.18
CD44-237ENST00000534082 NOB1Q9ULX3 412 aaKnown RBP7.7□□□□□ -1.18
CD44-237ENST00000534082 RWDD3Q9Y3V2 267 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 PCDHB3Q9Y5E6 796 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 PCDHGC5Q9Y5F6 944 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 FAM208BQ5VWN6 2430 aa7.7□□□□□ -1.18
CD44-237ENST00000534082 TMEM232C9JQI7 657 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 LMNAP02545 664 aaKnown RBP7.69□□□□□ -1.18
CD44-237ENST00000534082 GNAI2P04899 355 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 MMP3P08254 477 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 LINC00271P0C7V0 271 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 BMP3P12645 472 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 ATF7P17544 494 aaPredicted RBP7.69□□□□□ -1.18
CD44-237ENST00000534082 NRIP1P48552 1158 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 IKQ13123 557 aaPredicted RBP7.69□□□□□ -1.18
CD44-237ENST00000534082 MTMR3Q13615 1198 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 PPP1R18Q6NYC8 613 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 RPAP2Q8IXW5 612 aaPredicted RBP7.69□□□□□ -1.18
CD44-237ENST00000534082 C7orf31Q8N865 590 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 GMCL1P1Q8NEA9 526 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 AFG1LQ8WV93 481 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 KAT2BQ92831 832 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 IL17RAQ96F46 866 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 DDRGK1Q96HY6 314 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 PRR14Q9BWN1 585 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 HDAC6Q9UBN7 1215 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 RALYQ9UKM9 306 aaKnown RBP7.69□□□□□ -1.18
CD44-237ENST00000534082 ADGRA3Q8IWK6 1321 aa7.69□□□□□ -1.18
CD44-237ENST00000534082 ASPMQ8IZT6 3477 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 OTOGLQ3ZCN5 2332 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 LOC102724159A0A0B4J2E5 919 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.68□□□□□ -1.18
CD44-237ENST00000534082 RSPH10B2B2RC85 870 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 BRD1O95696 1058 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 OATP04181 439 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 RSPH10BP0C881 870 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 TXNP10599 105 aaKnown RBP7.68□□□□□ -1.18
CD44-237ENST00000534082 RASA1P20936 1047 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 FECHP22830 423 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 SP100P23497 879 aaPredicted RBP7.68□□□□□ -1.18
CD44-237ENST00000534082 SNAP25P60880 206 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 PDE4DQ08499 809 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 CAMK1Q14012 370 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 BAATQ14032 418 aaPredicted RBP7.68□□□□□ -1.18
CD44-237ENST00000534082 PWP2Q15269 919 aaKnown RBP7.68□□□□□ -1.18
CD44-237ENST00000534082 TTF1Q15361 905 aaPredicted RBP7.68□□□□□ -1.18
CD44-237ENST00000534082 ANGPT1Q15389 498 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 KMT5BQ4FZB7 885 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 SLFN13Q68D06 897 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 FAM160B2Q86V87 743 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 UBALD2Q8IYN6 164 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 SUSD6Q92537 303 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 SEPT8Q92599 483 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 COL26A1Q96A83 441 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 EAF2Q96CJ1 260 aaPredicted RBP7.68□□□□□ -1.18
CD44-237ENST00000534082 HINFPQ9BQA5 517 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 MFSD1Q9H3U5 465 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 MRS2Q9HD23 443 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 CCPG1Q9ULG6 757 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 SYNPO2Q9UMS6 1093 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 SORCS3Q9UPU3 1222 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 ZBED9Q6R2W3 1325 aa7.68□□□□□ -1.18
CD44-237ENST00000534082 IGKV6D-41A0A0C4DH26 115 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 SURF6O75683 361 aaKnown RBP7.67□□□□□ -1.18
CD44-237ENST00000534082 ARIH2O95376 493 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 CFHP08603 1231 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 EDNRBP24530 442 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 DNAJB1P25685 340 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 THPOP40225 353 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 CLCN5P51795 746 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 ZNF200P98182 395 aaPredicted RBP7.67□□□□□ -1.18
CD44-237ENST00000534082 ACAP1Q15027 740 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 RSPO4Q2I0M5 234 aaPredicted RBP7.67□□□□□ -1.18
CD44-237ENST00000534082 CWF19L1Q69YN2 538 aaKnown RBP7.67□□□□□ -1.18
CD44-237ENST00000534082 CTR9Q6PD62 1173 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms