RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 C16orf86Q6ZW13 317 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 MYOCDQ8IZQ8 938 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 CAPS2Q9BXY5 557 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 EPB41L5Q9HCM4 733 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 COASYQ13057 564 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 FAM83BQ5T0W9 1011 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 SNED1Q8TER0 1413 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 CCDC88AQ3V6T2 1871 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 ZEB2O60315 1214 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 PDCLQ13371 301 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 HGSNATQ68CP4 663 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 FAM133AQ8N9E0 248 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 PANK4Q9NVE7 773 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 KLRC1P26715 233 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 GPSM2P81274 684 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 DPP8Q6V1X1 898 aaPredicted RBP21.3■■□□□ 1
CAPN1-226ENST00000533820 KLHL7Q8IXQ5 586 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 KRT12Q99456 494 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 SLC24A3Q9HC58 644 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 STK17AQ9UEE5 414 aa21.3■■□□□ 1
CAPN1-226ENST00000533820 PVALEFA0A1B0GWK0 134 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 FGFR1OPO95684 399 aaKnown RBP21.29■■□□□ 1
CAPN1-226ENST00000533820 PPP1R2P41236 205 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 PPP4CP60510 307 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 SFMBT2Q5VUG0 894 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 CCDC43Q96MW1 224 aaKnown RBP21.29■■□□□ 1
CAPN1-226ENST00000533820 SH3BP1Q9Y3L3 701 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 IRS2Q9Y4H2 1338 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 LAMB2P55268 1798 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 ECM2O94769 699 aaPredicted RBP21.29■■□□□ 1
CAPN1-226ENST00000533820 HEXIM1O94992 359 aaKnown RBP21.29■■□□□ 1
CAPN1-226ENST00000533820 AKR1B1P15121 316 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 LIG3P49916 1009 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 SLC9C1Q4G0N8 1177 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 TTMPQ5BVD1 217 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 FAM26FQ5R3K3 315 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 CENPHQ9H3R5 247 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 CD209Q9NNX6 404 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 KIAA1024Q9UPX6 916 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 RTCBQ9Y3I0 505 aaKnown RBP21.29■■□□□ 1
CAPN1-226ENST00000533820 COL4A3BPQ9Y5P4 624 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 ROBO1Q9Y6N7 1651 aa21.29■■□□□ 1
CAPN1-226ENST00000533820 HSF2BPO75031 334 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 KIAA0753Q2KHM9 967 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 HERC4Q5GLZ8 1057 aaPredicted RBP21.28■■□□□ 1
CAPN1-226ENST00000533820 KCTD1Q719H9 257 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 ZIM3Q96PE6 472 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 CEP89Q96ST8 783 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 RAB34Q9BZG1 259 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 DDX25Q9UHL0 483 aaKnown RBP21.28■■□□□ 1
CAPN1-226ENST00000533820 COL22A1Q8NFW1 1626 aaPredicted RBP21.28■■□□□ 1
CAPN1-226ENST00000533820 ROBO3Q96MS0 1386 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 A0A087X0T9 212 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 FAM228BP0C875 321 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 ACTN1P12814 892 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 LRRC63Q05C16 580 aa21.28■■□□□ 1
CAPN1-226ENST00000533820 TULP1O00294 542 aaPredicted RBP21.27■■□□□ 1
CAPN1-226ENST00000533820 MPHOSPH10O00566 681 aaKnown RBP21.27■■□□□ 1
CAPN1-226ENST00000533820 RPS6KA4O75676 772 aa21.27■■□□□ 1
CAPN1-226ENST00000533820 NOL4O94818 638 aa21.27■■□□□ 1
CAPN1-226ENST00000533820 KRT18P05783 430 aaKnown RBP21.27■■□□□ 1
CAPN1-226ENST00000533820 IBSPP21815 317 aaPredicted RBP21.27■■□□□ 1
CAPN1-226ENST00000533820 STAT3P40763 770 aa21.27■■□□□ 1
CAPN1-226ENST00000533820 EPS15P42566 896 aa21.27■■□□□ 1
CAPN1-226ENST00000533820 EPHB4P54760 987 aa21.27■■□□□ 1
CAPN1-226ENST00000533820 SPATA31A5Q5VU36 1347 aa21.27■■□□□ 1
CAPN1-226ENST00000533820 SPATA31A7Q8IWB4 1347 aa21.27■■□□□ 1
CAPN1-226ENST00000533820 CFAP221Q4G0U5 840 aa21.27■■□□□ 1
CAPN1-226ENST00000533820 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.27■■□□□ 13e-6■■■■■ 38.5
CAPN1-226ENST00000533820 POTEB3A0JP26 581 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 POTECB2RU33 542 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L15C9J2P7 530 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L13C9JLJ4 530 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L11C9JVI0 530 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L18D6R9N7 530 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L22D6RA61 530 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L17D6RBQ6 530 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L19D6RCP7 530 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L20D6RJB6 530 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 FXR2P51116 673 aaKnown RBP eCLIP21.27■□□□□ 0.991e-6■■■□□ 14.6
CAPN1-226ENST00000533820 FKBP3Q00688 224 aaKnown RBP21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L24Q0WX57 530 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L6PQ6QN14 398 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 POTEBQ6S5H4 581 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 CCNL1Q9UK58 526 aaPredicted RBP21.27■□□□□ 0.99
CAPN1-226ENST00000533820 PCDHA12Q9UN75 941 aa21.27■□□□□ 0.99
CAPN1-226ENST00000533820 THRAP3Q9Y2W1 955 aaKnown RBP21.27■□□□□ 0.99
CAPN1-226ENST00000533820 PPP1R11O60927 126 aaPredicted RBP21.26■□□□□ 0.99
CAPN1-226ENST00000533820 RFC4P35249 363 aa21.26■□□□□ 0.99
CAPN1-226ENST00000533820 GRAPQ13588 217 aa21.26■□□□□ 0.99
CAPN1-226ENST00000533820 ASTE1Q2TB18 679 aaPredicted RBP21.26■□□□□ 0.99
CAPN1-226ENST00000533820 NBPF20Q3BBV1 942 aa21.26■□□□□ 0.99
CAPN1-226ENST00000533820 GRAPLQ8TC17 118 aaPredicted RBP21.26■□□□□ 0.99
CAPN1-226ENST00000533820 HAS1Q92839 578 aa21.26■□□□□ 0.99
CAPN1-226ENST00000533820 KLHL30Q0D2K2 578 aa21.26■□□□□ 0.99
CAPN1-226ENST00000533820 PPFIA1Q13136 1202 aa21.26■□□□□ 0.99
CAPN1-226ENST00000533820 DNAJC19Q96DA6 116 aa21.26■□□□□ 0.99
CAPN1-226ENST00000533820 RIOX1Q9H6W3 641 aa21.26■□□□□ 0.99
CAPN1-226ENST00000533820 RIMBP2O15034 1052 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 RHBDL3P58872 404 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms